1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
1144
1145
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
1186
1187
1188
1189
1190
1191
1192
1193
1194
1195
1196
1197
1198
1199
1200
1201
1202
1203
1204
1205
1206
1207
1208
1209
1210
1211
1212
1213
1214
1215
1216
1217
1218
1219
1220
1221
1222
1223
1224
1225
1226
1227
1228
1229
1230
1231
1232
1233
1234
1235
1236
1237
1238
1239
1240
1241
1242
1243
1244
1245
1246
1247
1248
1249
1250
1251
1252
1253
1254
1255
1256
1257
1258
1259
1260
1261
1262
1263
1264
1265
1266
1267
1268
1269
1270
1271
1272
1273
1274
1275
1276
1277
1278
1279
1280
1281
1282
1283
1284
1285
1286
1287
1288
1289
1290
1291
1292
1293
1294
1295
1296
1297
1298
1299
1300
1301
1302
1303
1304
1305
1306
1307
1308
1309
1310
1311
1312
1313
1314
1315
1316
1317
1318
1319
1320
1321
1322
1323
1324
1325
1326
1327
1328
1329
1330
1331
1332
1333
1334
1335
1336
1337
1338
1339
1340
1341
1342
1343
1344
1345
1346
1347
1348
1349
1350
1351
1352
1353
1354
1355
1356
1357
1358
1359
1360
1361
1362
1363
1364
1365
1366
1367
1368
1369
1370
1371
1372
1373
1374
1375
1376
1377
1378
1379
1380
1381
1382
1383
1384
1385
1386
1387
1388
1389
1390
1391
1392
1393
1394
1395
1396
1397
1398
1399
1400
1401
1402
1403
1404
1405
1406
1407
1408
1409
1410
1411
1412
1413
1414
1415
1416
1417
1418
1419
1420
1421
1422
1423
1424
1425
1426
1427
1428
1429
1430
1431
1432
1433
1434
1435
1436
1437
1438
1439
1440
1441
1442
1443
1444
1445
1446
1447
1448
1449
1450
1451
1452
1453
1454
1455
1456
1457
1458
1459
1460
1461
1462
1463
1464
1465
1466
1467
1468
1469
1470
1471
1472
1473
|
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.
Generated on January 28, 2013; 23:05 GMT
TreeBASE (cc) 1994-2008
Study reference:
Wu D., Hugenholtz P., Mavromatis K., Pukall R., Dalin E., Ivanova N.N., Kunin V.,
Goodwin L., Wu M., Tindall B.J., Hooper S.D., Pati A., Lykidis A., Spring S., Anderson
I.J., Dhaeseleer P., Zemla A., Singer M., Lapidus A., Nolan M., Copeland
A., Chen F., Cheng J., Lucas S., Kerfeld C., Lang E., Gronow S., Chain P., Bruce
D., Rubin E.M., Kyrpides N.C., Klenk H., & Eisen J.A. 2009. A phylogeny-driven
genomic encyclopaedia of Bacteria and Archaea. Nature, 462(7276): 1056-1060.
TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S10965]
BEGIN TAXA;
TITLE Taxa1;
DIMENSIONS NTAX=720;
TAXLABELS
Acaryochloris_marina_MBIC11017
Acholeplasma_laidlawii_PG_8A
Acidimicrobium_ferrooxidans
Acidiphilium_cryptum_JF_5
Acidobacteria_bacterium_Ellin345
Acidothermus_cellulolyticus_11B
Acidovorax_avenae_subsp._citrulli_AAC00_1
Acidovorax_sp._JS42
Acinetobacter_baumannii_ACICU
Acinetobacter_baumannii_ATCC_17978
Acinetobacter_baumannii_AYE
Acinetobacter_baumannii_SDF
Acinetobacter_sp._ADP1
Actinobacillus_pleuropneumoniae_L20
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76
Actinobacillus_succinogenes_130Z
Actinosynnema_mirum
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966
Aeromonas_salmonicida_subsp._salmonicida_A449
Agrobacterium_tumefaciens_str._C58
Akkermansia_muciniphila_ATCC_BAA_835
Alcanivorax_borkumensis_SK2
Alicyclobacillus_acidocaldarius
Alkalilimnicola_ehrlichei_MLHE_1
Alkaliphilus_metalliredigenes_QYMF
Alkaliphilus_oremlandii_OhILAs
Anabaena_variabilis_ATCC_29413
Anaerococcus_prevotii
Anaeromyxobacter_dehalogenans_2CP_C
'Anaeromyxobacter sp. Fw109-5'
Anaplasma_marginale_str._St_Maries
Anaplasma_phagocytophilum_HZ
Aquifex_aeolicus_VF5
Arcobacter_butzleri_RM4018
Arthrobacter_aurescens_TC1
Arthrobacter_sp._FB24
'Aster yellows witches''-broom phytoplasma AYWB'
Atopobium_parvulum
Azoarcus_sp._BH72
Azoarcus_sp._EbN1
Azorhizobium_caulinodans_ORS_571
Bacillus_amyloliquefaciens_FZB42
Bacillus_anthracis_str._Ames
Bacillus_anthracis_str._Ames_Ancestor
Bacillus_anthracis_str._Sterne
Bacillus_cereus_ATCC_10987
Bacillus_cereus_ATCC_14579
Bacillus_cereus_E33L
Bacillus_cereus_subsp._cytotoxis_NVH_391_98
Bacillus_clausii_KSM_K16
Bacillus_halodurans_C_125
Bacillus_licheniformis_ATCC_14580
Bacillus_pumilus_SAFR_032
Bacillus_subtilis_subsp._subtilis_str._168
'Bacillus thuringiensis serovar konkukian str. 97-27'
Bacillus_thuringiensis_str._Al_Hakam
Bacillus_weihenstephanensis_KBAB4
Bacteroides_fragilis_NCTC_9343
Bacteroides_fragilis_YCH46
Bacteroides_thetaiotaomicron_VPI_5482
Bacteroides_vulgatus_ATCC_8482
Bartonella_bacilliformis_KC583
Bartonella_henselae_str._Houston_1
Bartonella_quintana_str._Toulouse
Bartonella_tribocorum_CIP_105476
Baumannia_cicadellinicola_str._Hc_Homalodisca_coagulata
Bdellovibrio_bacteriovorus_HD100
Beijerinckia_indica_subsp._indica_ATCC_9039
Beutenbergia_cavernae
Bifidobacterium_adolescentis_ATCC_15703
Bifidobacterium_longum_DJO10A
Bifidobacterium_longum_NCC2705
Bordetella_avium_197N
Bordetella_bronchiseptica_RB50
Bordetella_parapertussis_12822
Bordetella_pertussis_Tohama_I
Bordetella_petrii_DSM_12804
Borrelia_afzelii_PKo
Borrelia_burgdorferi_B31
Borrelia_garinii_PBi
Borrelia_hermsii_DAH
Brachybacterium_faecium
Brachyspira_murdochii
Bradyrhizobium_japonicum_USDA_110
Bradyrhizobium_sp._BTAi1
Bradyrhizobium_sp._ORS278
Brucella_abortus_S19
'Brucella abortus biovar 1 str. 9-941'
Brucella_canis_ATCC_23365
Brucella_melitensis_16M
Brucella_melitensis_biovar_Abortus_2308
Brucella_ovis_ATCC_25840
Brucella_suis_1330
Brucella_suis_ATCC_23445
Buchnera_aphidicola_str._APS_Acyrthosiphon_pisum
Buchnera_aphidicola_str._Bp_Baizongia_pistaciae
Buchnera_aphidicola_str._Cc_Cinara_cedri
Buchnera_aphidicola_str._Sg_Schizaphis_graminum
Burkholderia_ambifaria_AMMD
Burkholderia_ambifaria_MC40_6
Burkholderia_cenocepacia_AU_1054
Burkholderia_cenocepacia_HI2424
Burkholderia_cenocepacia_MC0_3
Burkholderia_mallei_ATCC_23344
Burkholderia_mallei_NCTC_10229
Burkholderia_mallei_NCTC_10247
Burkholderia_mallei_SAVP1
Burkholderia_multivorans_ATCC_17616
Burkholderia_phymatum_STM815
Burkholderia_phytofirmans_PsJN
Burkholderia_pseudomallei_1106a
Burkholderia_pseudomallei_1710b
Burkholderia_pseudomallei_668
Burkholderia_pseudomallei_K96243
Burkholderia_sp._383
Burkholderia_thailandensis_E264
Burkholderia_vietnamiensis_G4
Burkholderia_xenovorans_LB400
Caldicellulosiruptor_saccharolyticus_DSM_8903
Campylobacter_concisus_13826
Campylobacter_curvus_525_92
'Campylobacter fetus subsp. fetus 82-40'
Campylobacter_hominis_ATCC_BAA_381
Campylobacter_jejuni_RM1221
Campylobacter_jejuni_subsp._doylei_269_97
Campylobacter_jejuni_subsp._jejuni_81_176
Campylobacter_jejuni_subsp._jejuni_81116
Campylobacter_jejuni_subsp._jejuni_NCTC_11168
Candidatus_Amoebophilus_asiaticus_5a2
Candidatus_Blochmannia_floridanus
Candidatus_Blochmannia_pennsylvanicus_str._BPEN
Candidatus_Desulfococcus_oleovorans_Hxd3
Candidatus_Desulforudis_audaxviator_MP104C
Candidatus_Pelagibacter_ubique_HTCC1062
Candidatus_Phytoplasma_mali
Candidatus_Protochlamydia_amoebophila_UWE25
'Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)'
Candidatus_Sulcia_muelleri_GWSS
Candidatus_Vesicomyosocius_okutanii_HA
Capnocytophaga_ochracea
Carboxydothermus_hydrogenoformans_Z_2901
Catenulispora_acidiphila
Caulobacter_crescentus_CB15
Caulobacter_sp._K31
Cellulomonas_flavigena
Cellvibrio_japonicus_Ueda107
Chitinophaga_pinensis
Chlamydia_muridarum_Nigg
Chlamydia_trachomatis_434_Bu
Chlamydia_trachomatis_A_HAR_13
Chlamydia_trachomatis_D_UW_3_CX
Chlamydia_trachomatis_L2b_UCH_1_proctitis
Chlamydophila_abortus_S26_3
Chlamydophila_caviae_GPIC
Chlamydophila_felis_Fe_C_56
Chlamydophila_pneumoniae_AR39
Chlamydophila_pneumoniae_CWL029
Chlamydophila_pneumoniae_J138
Chlamydophila_pneumoniae_TW_183
Chlorobaculum_parvum_NCIB_8327
Chlorobium_chlorochromatii_CaD3
Chlorobium_limicola_DSM_245
Chlorobium_phaeobacteroides_BS1
Chlorobium_phaeobacteroides_DSM_266
Chlorobium_tepidum_TLS
Chloroflexus_aurantiacus_J_10_fl
Chloroherpeton_thalassium_ATCC_35110
Chromobacterium_violaceum_ATCC_12472
Chromohalobacter_salexigens_DSM_3043
Citrobacter_koseri_ATCC_BAA_895
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382
Clavibacter_michiganensis_subsp._sepedonicus
Clostridium_acetobutylicum_ATCC_824
Clostridium_beijerinckii_NCIMB_8052
Clostridium_botulinum_A_str._ATCC_19397
Clostridium_botulinum_A_str._ATCC_3502
Clostridium_botulinum_A_str._Hall
Clostridium_botulinum_A3_str._Loch_Maree
Clostridium_botulinum_B_str._Eklund_17B
Clostridium_botulinum_B1_str._Okra
Clostridium_botulinum_E3_str._Alaska_E43
Clostridium_botulinum_F_str._Langeland
Clostridium_difficile_630
Clostridium_kluyveri_DSM_555
Clostridium_novyi_NT
Clostridium_perfringens_ATCC_13124
Clostridium_perfringens_SM101
Clostridium_perfringens_str._13
Clostridium_phytofermentans_ISDg
Clostridium_tetani_E88
Clostridium_thermocellum_ATCC_27405
Colwellia_psychrerythraea_34H
Conexibacter_woesei
Corynebacterium_diphtheriae_NCTC_13129
Corynebacterium_efficiens_YS_314
Corynebacterium_glutamicum_ATCC_13032
Corynebacterium_glutamicum_R
Corynebacterium_jeikeium_K411
Corynebacterium_urealyticum_DSM_7109
Coxiella_burnetii_Dugway_5J108_111
Coxiella_burnetii_RSA_331
Coxiella_burnetii_RSA_493
Cryptobacterium_curtum
Cupriavidus_taiwanensis
Cyanothece_sp._ATCC_51142
Cytophaga_hutchinsonii_ATCC_33406
Dechloromonas_aromatica_RCB
Dehalococcoides_ethenogenes_195
Dehalococcoides_sp._BAV1
Dehalococcoides_sp._CBDB1
Deinococcus_geothermalis_DSM_11300
Deinococcus_radiodurans_R1
Delftia_acidovorans_SPH_1
Denitrovibrio_acetiphilus
Desulfitobacterium_hafniense_Y51
Desulfohalobium_retbaense
Desulfomicrobium_baculatum
Desulfotalea_psychrophila_LSv54
Desulfotomaculum_acetoxidans
Desulfotomaculum_reducens_MI_1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._G20
Desulfovibrio_vulgaris_subsp._vulgaris_DP4
Desulfovibrio_vulgaris_subsp._vulgaris_str._Hildenborough
Dethiosulfovibrio_peptidovorans
Dichelobacter_nodosus_VCS1703A
Dinoroseobacter_shibae_DFL_12
Dyadobacter_fermentans
Eggerthella_lenta
Ehrlichia_canis_str._Jake
Ehrlichia_chaffeensis_str._Arkansas
Ehrlichia_ruminantium_str._Gardel
Ehrlichia_ruminantium_str._Welgevonden
Elusimicrobium_minutum_Pei191
Enterobacter_sakazakii_ATCC_BAA_894
Enterobacter_sp._638
Enterococcus_faecalis_V583
Erwinia_carotovora_subsp._atroseptica_SCRI1043
Erwinia_tasmaniensis
Erythrobacter_litoralis_HTCC2594
Escherichia_coli_536
Escherichia_coli_APEC_O1
Escherichia_coli_ATCC_8739
Escherichia_coli_CFT073
Escherichia_coli_E24377A
Escherichia_coli_HS
Escherichia_coli_O157_H7_EDL933
Escherichia_coli_O157_H7_str._Sakai
Escherichia_coli_SMS_3_5
Escherichia_coli_UTI89
Escherichia_coli_str._K12_substr_DH10B
Escherichia_coli_str._K12_substr_MG1655
Exiguobacterium_sibiricum_255_15
Fervidobacterium_nodosum_Rt17_B1
Finegoldia_magna_ATCC_29328
Flavobacterium_johnsoniae_UW101
Flavobacterium_psychrophilum_JIP02_86
Francisella_philomiragia_subsp._philomiragia_ATCC_25017
Francisella_tularensis_subsp._holarctica
Francisella_tularensis_subsp._holarctica_FTNF002_00
Francisella_tularensis_subsp._holarctica_OSU18
Francisella_tularensis_subsp._mediasiatica_FSC147
Francisella_tularensis_subsp._novicida_U112
Francisella_tularensis_subsp._tularensis_FSC198
Francisella_tularensis_subsp._tularensis_SCHU_S4
Francisella_tularensis_subsp._tularensis_WY96_3418
Frankia_alni_ACN14a
Frankia_sp._CcI3
Frankia_sp._EAN1pec
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586
Geobacillus_kaustophilus_HTA426
Geobacillus_thermodenitrificans_NG80_2
Geobacter_lovleyi_SZ
Geobacter_metallireducens_GS_15
Geobacter_sulfurreducens_PCA
Geobacter_uraniumreducens_Rf4
Geodermatophilus_obscurus
Gloeobacter_violaceus_PCC_7421
Gluconacetobacter_diazotrophicus_PAl_5
Gluconobacter_oxydans_621H
Gordonia_bronchialis
Gramella_forsetii_KT0803
Granulibacter_bethesdensis_CGDNIH1
Haemophilus_ducreyi_35000HP
Haemophilus_influenzae_86_028NP
Haemophilus_influenzae_PittEE
Haemophilus_influenzae_PittGG
Haemophilus_influenzae_Rd_KW20
Haemophilus_somnus_129PT
Haemophilus_somnus_2336
Hahella_chejuensis_KCTC_2396
Haliangium_ochraceum
Halorhodospira_halophila_SL1
Helicobacter_acinonychis_str._Sheeba
Helicobacter_hepaticus_ATCC_51449
Helicobacter_pylori_26695
Helicobacter_pylori_HPAG1
Helicobacter_pylori_J99
Helicobacter_pylori_Shi470
Heliobacterium_modesticaldum_Ice1
Herminiimonas_arsenicoxydans
Herpetosiphon_aurantiacus_ATCC_23779
Hyphomonas_neptunium_ATCC_15444
Idiomarina_loihiensis_L2TR
Jannaschia_sp._CCS1
Janthinobacterium_sp._Marseille
Jonesia_denitrificans
Kangiella_koreensis
Kineococcus_radiotolerans_SRS30216
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578
Kocuria_rhizophila_DC2201
Kribbella_flavida
Kytococcus_sedentarius
Lactobacillus_acidophilus_NCFM
Lactobacillus_brevis_ATCC_367
Lactobacillus_casei_ATCC_334
Lactobacillus_casei_BL23
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA_365
Lactobacillus_fermentum_IFO_3956
Lactobacillus_gasseri_ATCC_33323
Lactobacillus_helveticus_DPC_4571
Lactobacillus_johnsonii_NCC_533
Lactobacillus_plantarum_WCFS1
Lactobacillus_reuteri_F275
Lactobacillus_sakei_subsp._sakei_23K
Lactobacillus_salivarius_UCC118
Lactococcus_lactis_subsp._cremoris_MG1363
Lactococcus_lactis_subsp._cremoris_SK11
Lactococcus_lactis_subsp._lactis_Il1403
Lawsonia_intracellularis_PHE_MN1_00
Legionella_pneumophila_str._Corby
Legionella_pneumophila_str._Lens
Legionella_pneumophila_str._Paris
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1
Leifsonia_xyli_subsp._xyli_str._CTCB07
Leptospira_biflexa_serovar_Patoc_strain_Patoc_1_Ames
Leptospira_biflexa_serovar_Patoc_strain_Patoc_1_Paris
'Leptospira borgpetersenii serovar Hardjo-bovis JB197'
'Leptospira borgpetersenii serovar Hardjo-bovis L550'
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1_130
Leptospira_interrogans_serovar_Lai_str._56601
Leptothrix_cholodnii_sp._6
Leptotrichia_buccalis
Leuconostoc_citreum_KM20
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293
Listeria_innocua_Clip11262
Listeria_monocytogenes_EGD_e
Listeria_monocytogenes_str._4b_F2365
Listeria_welshimeri_serovar_6b_str._SLCC5334
Lysinibacillus_sphaericus_C3_41
'Magnetococcus sp. MC-1'
Magnetospirillum_magneticum_AMB_1
Mannheimia_succiniciproducens_MBEL55E
Maricaulis_maris_MCS10
Marinobacter_aquaeolei_VT8
Marinomonas_sp._MWYL1
Meiothermus_ruber
Meiothermus_silvanus
Mesoplasma_florum_L1
Mesorhizobium_loti_MAFF303099
Mesorhizobium_sp._BNC1
Methylacidiphilum_infernorum_V4
Methylibium_petroleiphilum_PM1
Methylobacillus_flagellatus_KT
Methylobacterium_extorquens_PA1
Methylobacterium_populi_BJ001
Methylobacterium_radiotolerans_JCM_2831
Methylobacterium_sp._4_46
Methylococcus_capsulatus_str._Bath
Microcystis_aeruginosa_NIES_843
Moorella_thermoacetica_ATCC_39073
Mycobacterium_abscessus
Mycobacterium_avium_104
Mycobacterium_avium_subsp._paratuberculosis_K_10
Mycobacterium_bovis_AF2122_97
Mycobacterium_bovis_BCG_str._Pasteur_1173P2
Mycobacterium_gilvum_PYR_GCK
Mycobacterium_leprae_TN
Mycobacterium_marinum_M
Mycobacterium_smegmatis_str._MC2_155
Mycobacterium_sp._JLS
Mycobacterium_sp._KMS
Mycobacterium_sp._MCS
Mycobacterium_tuberculosis_CDC1551
Mycobacterium_tuberculosis_F11
Mycobacterium_tuberculosis_H37Ra
Mycobacterium_tuberculosis_H37Rv
Mycobacterium_ulcerans_Agy99
Mycobacterium_vanbaalenii_PYR_1
Mycoplasma_agalactiae_PG2
Mycoplasma_arthritidis_158L3_1
Mycoplasma_capricolum_subsp._capricolum_ATCC_27343
Mycoplasma_gallisepticum_R
Mycoplasma_genitalium_G37
Mycoplasma_hyopneumoniae_232
Mycoplasma_hyopneumoniae_7448
Mycoplasma_hyopneumoniae_J
Mycoplasma_mobile_163K
Mycoplasma_mycoides_subsp._mycoides_SC_str._PG1
Mycoplasma_penetrans_HF_2
Mycoplasma_pneumoniae_M129
Mycoplasma_pulmonis_UAB_CTIP
Mycoplasma_synoviae_53
Myxococcus_xanthus_DK_1622
Nakamurella_multipartita
Natranaerobius_thermophilus_JW_NM_WN_LF
Neisseria_gonorrhoeae_FA_1090
Neisseria_gonorrhoeae_NCCP11945
Neisseria_meningitidis_053442
Neisseria_meningitidis_FAM18
Neisseria_meningitidis_MC58
Neisseria_meningitidis_Z2491
Neorickettsia_sennetsu_str._Miyayama
Nitratiruptor_sp._SB155_2
Nitrobacter_hamburgensis_X14
Nitrobacter_winogradskyi_Nb_255
Nitrosococcus_oceani_ATCC_19707
Nitrosomonas_europaea_ATCC_19718
Nitrosomonas_eutropha_C91
Nitrosospira_multiformis_ATCC_25196
Nocardia_farcinica_IFM_10152
Nocardioides_sp._JS614
Nocardiopsis_dassonvillei
Nostoc_punctiforme_PCC_73102
Nostoc_sp._PCC_7120
Novosphingobium_aromaticivorans_DSM_12444
Oceanobacillus_iheyensis_HTE831
Ochrobactrum_anthropi_ATCC_49188
Oenococcus_oeni_PSU_1
'Onion yellows phytoplasma OY-M'
Opitutus_terrae_PB90_1
Orientia_tsutsugamushi_Boryong
Orientia_tsutsugamushi_str._Ikeda
Parabacteroides_distasonis_ATCC_8503
Paracoccus_denitrificans_PD1222
Parvibaculum_lavamentivorans_DS_1
Pasteurella_multocida_subsp._multocida_str._Pm70
Pediococcus_pentosaceus_ATCC_25745
Pedobacter_heparinus
Pelobacter_carbinolicus_DSM_2380
Pelobacter_propionicus_DSM_2379
Pelodictyon_luteolum_DSM_273
Pelotomaculum_thermopropionicum_SI
Petrotoga_mobilis_SJ95
Photobacterium_profundum_SS9
Photorhabdus_luminescens_subsp._laumondii_TTO1
Planctomyces_limnophilus
Polaromonas_naphthalenivorans_CJ2
Polaromonas_sp._JS666
Polynucleobacter_necessarius_STIR1
'Polynucleobacter sp. QLW-P1DMWA-1'
Porphyromonas_gingivalis_ATCC_33277
Porphyromonas_gingivalis_W83
Prochlorococcus_marinus_str._AS9601
Prochlorococcus_marinus_str._MIT_9211
Prochlorococcus_marinus_str._MIT_9215
Prochlorococcus_marinus_str._MIT_9301
Prochlorococcus_marinus_str._MIT_9303
Prochlorococcus_marinus_str._MIT_9312
Prochlorococcus_marinus_str._MIT_9313
Prochlorococcus_marinus_str._MIT_9515
Prochlorococcus_marinus_str._NATL1A
Prochlorococcus_marinus_str._NATL2A
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986
Propionibacterium_acnes_KPA171202
Prosthecochloris_vibrioformis_DSM_265
Pseudoalteromonas_atlantica_T6c
Pseudoalteromonas_haloplanktis_TAC125
Pseudomonas_aeruginosa_PA7
Pseudomonas_aeruginosa_PAO1
Pseudomonas_aeruginosa_UCBPP_PA14
Pseudomonas_entomophila_L48
Pseudomonas_fluorescens_Pf_5
Pseudomonas_fluorescens_PfO_1
Pseudomonas_mendocina_ymp
Pseudomonas_putida_F1
Pseudomonas_putida_GB_1
Pseudomonas_putida_KT2440
Pseudomonas_putida_W619
Pseudomonas_stutzeri_A1501
Pseudomonas_syringae_pv._phaseolicola_1448A
Pseudomonas_syringae_pv._syringae_B728a
Pseudomonas_syringae_pv._tomato_str._DC3000
Psychrobacter_arcticus_273_4
Psychrobacter_cryohalolentis_K5
'Psychrobacter sp. PRwf-1'
Psychromonas_ingrahamii_37
Ralstonia_eutropha_H16
Ralstonia_eutropha_JMP134
Ralstonia_metallidurans_CH34
Ralstonia_pickettii_12J
Ralstonia_solanacearum_GMI1000
Renibacterium_salmoninarum_ATCC_33209
Rhizobium_etli_CFN_42
Rhizobium_etli_CIAT_652
Rhizobium_leguminosarum_bv._viciae_3841
Rhodobacter_sphaeroides_2_4_1
Rhodobacter_sphaeroides_ATCC_17025
Rhodobacter_sphaeroides_ATCC_17029
Rhodococcus_sp._RHA1
Rhodoferax_ferrireducens_T118
Rhodopirellula_baltica_SH_1
Rhodopseudomonas_palustris_BisA53
Rhodopseudomonas_palustris_BisB18
Rhodopseudomonas_palustris_BisB5
Rhodopseudomonas_palustris_CGA009
Rhodopseudomonas_palustris_HaA2
Rhodopseudomonas_palustris_TIE_1
Rhodospirillum_rubrum_ATCC_11170
Rhodothermus_marinus
Rickettsia_akari_str._Hartford
Rickettsia_bellii_OSU_85_389
Rickettsia_bellii_RML369_C
Rickettsia_canadensis_str._McKiel
Rickettsia_conorii_str._Malish_7
Rickettsia_felis_URRWXCal2
Rickettsia_massiliae_MTU5
Rickettsia_prowazekii_str._Madrid_E
Rickettsia_rickettsii_str._Iowa
Rickettsia_rickettsii_str._Sheila_Smith
Rickettsia_typhi_str._Wilmington
Roseiflexus_castenholzii_DSM_13941
'Roseiflexus sp. RS-1'
Roseobacter_denitrificans_OCh_114
Rubrobacter_xylanophilus_DSM_9941
Saccharomonospora_viridis
Saccharophagus_degradans_2_40
Saccharopolyspora_erythraea_NRRL_2338
Salinibacter_ruber_DSM_13855
Salinispora_arenicola_CNS_205
Salinispora_tropica_CNB_440
Salmonella_enterica_subsp._arizonae_serovar_62_z4_z23
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC_B67
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2
Salmonella_typhimurium_LT2
Sanguibacter_keddieii
Sebaldella_termitidis
Serratia_proteamaculans_568
Shewanella_amazonensis_SB2B
Shewanella_baltica_OS155
Shewanella_baltica_OS185
Shewanella_baltica_OS195
Shewanella_denitrificans_OS217
Shewanella_frigidimarina_NCIMB_400
Shewanella_halifaxensis_HAW_EB4
Shewanella_loihica_pv._4
Shewanella_oneidensis_MR_1
Shewanella_pealeana_ATCC_700345
Shewanella_putrefaciens_CN_32
Shewanella_sediminis_HAW_EB3
'Shewanella sp. ANA-3'
'Shewanella sp. MR-4'
'Shewanella sp. MR-7'
Shewanella_sp._W3_18_1
Shewanella_woodyi_ATCC_51908
Shigella_boydii_CDC_3083_94
Shigella_boydii_Sb227
Shigella_dysenteriae_Sd197
Shigella_flexneri_2a_str._2457T
Shigella_flexneri_2a_str._301
Shigella_flexneri_5_str._8401
Shigella_sonnei_Ss046
Silicibacter_pomeroyi_DSS_3
Silicibacter_sp._TM1040
Sinorhizobium_medicae_WSM419
Sinorhizobium_meliloti_1021
Slackia_heliotrinireducens
Sodalis_glossinidius_str._morsitans
Solibacter_usitatus_Ellin6076
Sorangium_cellulosum_So_ce_56
Sphaerobacter_thermophilus
Sphingomonas_wittichii_RW1
Sphingopyxis_alaskensis_RB2256
Spirosoma_linguale
Stackebrandtia_nassauensis
Staphylococcus_aureus_RF122
Staphylococcus_aureus_subsp._aureus_COL
Staphylococcus_aureus_subsp._aureus_JH1
Staphylococcus_aureus_subsp._aureus_JH9
Staphylococcus_aureus_subsp._aureus_MRSA252
Staphylococcus_aureus_subsp._aureus_MSSA476
Staphylococcus_aureus_subsp._aureus_MW2
Staphylococcus_aureus_subsp._aureus_Mu3
Staphylococcus_aureus_subsp._aureus_Mu50
Staphylococcus_aureus_subsp._aureus_N315
Staphylococcus_aureus_subsp._aureus_NCTC_8325
Staphylococcus_aureus_subsp._aureus_USA300
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516
Staphylococcus_aureus_subsp._aureus_str._Newman
Staphylococcus_epidermidis_ATCC_12228
Staphylococcus_epidermidis_RP62A
Staphylococcus_haemolyticus_JCSC1435
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305
Stenotrophomonas_maltophilia_K279a
Streptobacillus_moniliformis
Streptococcus_agalactiae_2603V_R
Streptococcus_agalactiae_A909
Streptococcus_agalactiae_NEM316
Streptococcus_gordonii_str._Challis_substr_CH1
Streptococcus_mutans_UA159
Streptococcus_pneumoniae_CGSP14
Streptococcus_pneumoniae_D39
Streptococcus_pneumoniae_Hungary19A_6
Streptococcus_pneumoniae_R6
Streptococcus_pneumoniae_TIGR4
Streptococcus_pyogenes_M1_GAS
Streptococcus_pyogenes_MGAS10270
Streptococcus_pyogenes_MGAS10394
Streptococcus_pyogenes_MGAS10750
Streptococcus_pyogenes_MGAS2096
Streptococcus_pyogenes_MGAS315
Streptococcus_pyogenes_MGAS5005
Streptococcus_pyogenes_MGAS6180
Streptococcus_pyogenes_MGAS8232
Streptococcus_pyogenes_MGAS9429
Streptococcus_pyogenes_SSI_1
Streptococcus_pyogenes_str._Manfredo
Streptococcus_sanguinis_SK36
Streptococcus_suis_05ZYH33
Streptococcus_suis_98HAH33
Streptococcus_thermophilus_CNRZ1066
Streptococcus_thermophilus_LMD_9
Streptococcus_thermophilus_LMG_18311
Streptomyces_avermitilis_MA_4680
Streptomyces_coelicolor_A3_2
Streptomyces_griseus_subsp._griseus_NBRC_13350
Streptosporangium_roseum
Sulfurihydrogenibium_sp._YO3AOP1
Sulfurimonas_denitrificans_DSM_1251
Sulfurospirillum_deleyianum
Sulfurovum_sp._NBC37_1
Symbiobacterium_thermophilum_IAM_14863
Synechococcus_elongatus_PCC_6301
Synechococcus_elongatus_PCC_7942
Synechococcus_sp._CC9311
Synechococcus_sp._CC9605
Synechococcus_sp._CC9902
'Synechococcus sp. JA-2-3B''a(2-13)'
'Synechococcus sp. JA-3-3Ab'
Synechococcus_sp._PCC_7002
Synechococcus_sp._RCC307
Synechococcus_sp._WH_7803
Synechococcus_sp._WH_8102
Synechocystis_sp._PCC_6803
Syntrophobacter_fumaroxidans_MPOB
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen
Syntrophus_aciditrophicus_SB
Thermanaerovibrio_acidaminovorans
Thermoanaerobacter_pseudethanolicus_ATCC_33223
Thermoanaerobacter_sp._X514
Thermoanaerobacter_tengcongensis_MB4
Thermobaculum_terrenum
Thermobifida_fusca_YX
Thermobispora_bispora
Thermomonospora_curvata
Thermosipho_melanesiensis_BI429
Thermosynechococcus_elongatus_BP_1
Thermotoga_lettingae_TMO
Thermotoga_maritima_MSB8
Thermotoga_petrophila_RKU_1
Thermotoga_sp._RQ2
Thermus_thermophilus_HB27
Thermus_thermophilus_HB8
Thiobacillus_denitrificans_ATCC_25259
Thiomicrospira_crunogena_XCL_2
Treponema_denticola_ATCC_35405
Treponema_pallidum_subsp._pallidum_SS14
Treponema_pallidum_subsp._pallidum_str._Nichols
Trichodesmium_erythraeum_IMS101
Tropheryma_whipplei_TW08_27
Tropheryma_whipplei_str._Twist
Tsukamurella_paurometabola
Ureaplasma_parvum_serovar_3_str._ATCC_27815
Ureaplasma_parvum_serovar_3_str._ATCC_700970
Veillonella_parvula
Verminephrobacter_eiseniae_EF01_2
Vibrio_cholerae_O1_biovar_eltor_str._N16961
Vibrio_cholerae_O395
Vibrio_fischeri_ES114
Vibrio_harveyi_ATCC_BAA_1116
Vibrio_parahaemolyticus_RIMD_2210633
Vibrio_vulnificus_CMCP6
Vibrio_vulnificus_YJ016
Wigglesworthia_glossinidia_endosymbiont_of_Glossina_brevipalpis
Wolbachia_endosymbiont_of_Drosophila_melanogaster
Wolbachia_endosymbiont_strain_TRS_of_Brugia_malayi
Wolbachia_pipientis
Wolinella_succinogenes_DSM_1740
Xanthobacter_autotrophicus_Py2
Xanthomonas_axonopodis_pv._citri_str._306
Xanthomonas_campestris_pv._campestris
Xanthomonas_campestris_pv._campestris_str._8004
Xanthomonas_campestris_pv._campestris_str._ATCC_33913
Xanthomonas_campestris_pv._vesicatoria_str._85_10
Xanthomonas_oryzae_pv._oryzae_KACC10331
Xanthomonas_oryzae_pv._oryzae_MAFF_311018
Xanthomonas_oryzae_pv._oryzae_PXO99A
Xylanimonas_cellulosilytica
Xylella_fastidiosa_9a5c
Xylella_fastidiosa_M12
Xylella_fastidiosa_M23
Xylella_fastidiosa_Temecula1
Yersinia_enterocolitica_subsp._enterocolitica_8081
Yersinia_pestis_Angola
Yersinia_pestis_Antiqua
Yersinia_pestis_CO92
Yersinia_pestis_KIM
Yersinia_pestis_Nepal516
Yersinia_pestis_Pestoides_F
Yersinia_pestis_biovar_Microtus_str._91001
Yersinia_pseudotuberculosis_IP_31758
Yersinia_pseudotuberculosis_IP_32953
Yersinia_pseudotuberculosis_PB1
Yersinia_pseudotuberculosis_YPIII
Zymomonas_mobilis_subsp._mobilis_ZM4
;
END;
BEGIN TREES;
TITLE GEBA_720_TB;
LINK TAXA = Taxa1;
TRANSLATE
1 Gordonia_bronchialis,
2 Tsukamurella_paurometabola,
3 Alicyclobacillus_acidocaldarius,
4 Dyadobacter_fermentans,
5 Sulfurospirillum_deleyianum,
6 Thermobispora_bispora,
7 Sphaerobacter_thermophilus,
8 Atopobium_parvulum,
9 Jonesia_denitrificans,
10 Capnocytophaga_ochracea,
11 Chitinophaga_pinensis,
12 Kribbella_flavida,
13 Eggerthella_lenta,
14 Planctomyces_limnophilus,
15 Cellulomonas_flavigena,
16 Nakamurella_multipartita,
17 Meiothermus_silvanus,
18 Anaerococcus_prevotii,
19 Spirosoma_linguale,
20 Thermobaculum_terrenum,
21 Actinosynnema_mirum,
22 Meiothermus_ruber,
23 Haliangium_ochraceum,
24 Desulfotomaculum_acetoxidans,
25 Brachyspira_murdochii,
26 Pedobacter_heparinus,
27 Sanguibacter_keddieii,
28 Veillonella_parvula,
29 Slackia_heliotrinireducens,
30 Saccharomonospora_viridis,
31 Geodermatophilus_obscurus,
32 Desulfohalobium_retbaense,
33 Streptobacillus_moniliformis,
34 Kytococcus_sedentarius,
35 Nocardiopsis_dassonvillei,
36 Stackebrandtia_nassauensis,
37 Denitrovibrio_acetiphilus,
38 Sebaldella_termitidis,
39 Catenulispora_acidiphila,
40 Desulfomicrobium_baculatum,
41 Beutenbergia_cavernae,
42 Brachybacterium_faecium,
43 Thermanaerovibrio_acidaminovorans,
44 Xylanimonas_cellulosilytica,
45 Kangiella_koreensis,
46 Dethiosulfovibrio_peptidovorans,
47 Streptosporangium_roseum,
48 Rhodothermus_marinus,
49 Leptotrichia_buccalis,
50 Conexibacter_woesei,
51 Cryptobacterium_curtum,
52 Acidimicrobium_ferrooxidans,
53 Thermomonospora_curvata,
54 Geobacter_uraniumreducens_Rf4,
55 Mycoplasma_hyopneumoniae_7448,
56 Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC_B67,
57 Bacillus_cereus_E33L,
58 Desulfovibrio_vulgaris_subsp._vulgaris_str._Hildenborough,
59 Microcystis_aeruginosa_NIES_843,
60 Coxiella_burnetii_Dugway_5J108_111,
61 Streptococcus_thermophilus_CNRZ1066,
62 Bacillus_halodurans_C_125,
63 Actinobacillus_succinogenes_130Z,
64 Mannheimia_succiniciproducens_MBEL55E,
65 Bacillus_amyloliquefaciens_FZB42,
66 Clostridium_tetani_E88,
67 Rhodopseudomonas_palustris_BisB18,
68 Nocardia_farcinica_IFM_10152,
69 Francisella_tularensis_subsp._novicida_U112,
70 'Psychrobacter sp. PRwf-1',
71 Bacteroides_vulgatus_ATCC_8482,
72 Haemophilus_somnus_129PT,
73 Lawsonia_intracellularis_PHE_MN1_00,
74 Borrelia_afzelii_PKo,
75 Acinetobacter_baumannii_SDF,
76 Mycobacterium_tuberculosis_CDC1551,
77 Mycobacterium_sp._JLS,
78 Chlamydophila_pneumoniae_TW_183,
79 Neisseria_meningitidis_MC58,
80 Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382,
81 Clostridium_kluyveri_DSM_555,
82 Staphylococcus_aureus_subsp._aureus_USA300,
83 Mycoplasma_capricolum_subsp._capricolum_ATCC_27343,
84 Pseudoalteromonas_atlantica_T6c,
85 Brucella_melitensis_biovar_Abortus_2308,
86 Streptococcus_pyogenes_str._Manfredo,
87 Anaeromyxobacter_dehalogenans_2CP_C,
88 Enterococcus_faecalis_V583,
89 Xanthomonas_campestris_pv._campestris,
90 Xanthomonas_campestris_pv._campestris_str._ATCC_33913,
91 Burkholderia_cenocepacia_MC0_3,
92 Helicobacter_acinonychis_str._Sheeba,
93 Mycobacterium_marinum_M,
94 Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150,
95 Haemophilus_influenzae_86_028NP,
96 Xylella_fastidiosa_9a5c,
97 Bacillus_anthracis_str._Ames,
98 Maricaulis_maris_MCS10,
99 Vibrio_vulnificus_YJ016,
100 Chlorobaculum_parvum_NCIB_8327,
101 Treponema_pallidum_subsp._pallidum_SS14,
102 Methylacidiphilum_infernorum_V4,
103 Xylella_fastidiosa_Temecula1,
104 Borrelia_burgdorferi_B31,
105 Shewanella_loihica_pv._4,
106 'Onion yellows phytoplasma OY-M',
107 Campylobacter_concisus_13826,
108 Mycoplasma_genitalium_G37,
109 Methylobacterium_radiotolerans_JCM_2831,
110 'Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)',
111 Actinobacillus_pleuropneumoniae_serovar_3_str._JL03,
112 Finegoldia_magna_ATCC_29328,
113 Burkholderia_mallei_ATCC_23344,
114 Petrotoga_mobilis_SJ95,
115 'Polynucleobacter sp. QLW-P1DMWA-1',
116 Geobacillus_thermodenitrificans_NG80_2,
117 Mycoplasma_penetrans_HF_2,
118 Pseudoalteromonas_haloplanktis_TAC125,
119 Azorhizobium_caulinodans_ORS_571,
120 Opitutus_terrae_PB90_1,
121 Chlamydophila_pneumoniae_J138,
122 Akkermansia_muciniphila_ATCC_BAA_835,
123 Anaplasma_phagocytophilum_HZ,
124 Exiguobacterium_sibiricum_255_15,
125 Leuconostoc_citreum_KM20,
126 Pseudomonas_aeruginosa_UCBPP_PA14,
127 Agrobacterium_tumefaciens_str._C58,
128 Corynebacterium_efficiens_YS_314,
129 Gramella_forsetii_KT0803,
130 Pseudomonas_fluorescens_PfO_1,
131 Bartonella_tribocorum_CIP_105476,
132 Gloeobacter_violaceus_PCC_7421,
133 Escherichia_coli_O157_H7_str._Sakai,
134 Francisella_tularensis_subsp._holarctica_OSU18,
135 Yersinia_enterocolitica_subsp._enterocolitica_8081,
136 Candidatus_Protochlamydia_amoebophila_UWE25,
137 Wigglesworthia_glossinidia_endosymbiont_of_Glossina_brevipalpis,
138 Mycoplasma_mobile_163K,
139 Clostridium_botulinum_B1_str._Okra,
140 'Shewanella sp. ANA-3',
141 Streptococcus_agalactiae_A909,
142 Yersinia_pseudotuberculosis_PB1,
143 Clostridium_difficile_630,
144 Nostoc_punctiforme_PCC_73102,
145 Hahella_chejuensis_KCTC_2396,
146 Bifidobacterium_longum_DJO10A,
147 Mycobacterium_sp._MCS,
148 Staphylococcus_aureus_subsp._aureus_Mu3,
149 Ehrlichia_ruminantium_str._Gardel,
150 Mycoplasma_mycoides_subsp._mycoides_SC_str._PG1,
151 Rhizobium_etli_CFN_42,
152 Sphingomonas_wittichii_RW1,
153 Helicobacter_pylori_26695,
154 Coxiella_burnetii_RSA_493,
155 Rhodopseudomonas_palustris_BisA53,
156 Mycobacterium_smegmatis_str._MC2_155,
157 Chromohalobacter_salexigens_DSM_3043,
158 Burkholderia_multivorans_ATCC_17616,
159 Burkholderia_phytofirmans_PsJN,
160 Sinorhizobium_medicae_WSM419,
161 Bacillus_cereus_ATCC_14579,
162 Prochlorococcus_marinus_str._MIT_9313,
163 Mycoplasma_agalactiae_PG2,
164 Kineococcus_radiotolerans_SRS30216,
165 Acidiphilium_cryptum_JF_5,
166 Streptococcus_suis_05ZYH33,
167 Hyphomonas_neptunium_ATCC_15444,
168 Burkholderia_ambifaria_AMMD,
169 Clostridium_thermocellum_ATCC_27405,
170 Candidatus_Vesicomyosocius_okutanii_HA,
171 Mycoplasma_hyopneumoniae_232,
172 Neisseria_meningitidis_Z2491,
173 Desulfitobacterium_hafniense_Y51,
174 Staphylococcus_aureus_subsp._aureus_MW2,
175 Thermotoga_maritima_MSB8,
176 Staphylococcus_haemolyticus_JCSC1435,
177 Buchnera_aphidicola_str._Bp_Baizongia_pistaciae,
178 Xanthomonas_campestris_pv._campestris_str._8004,
179 Streptococcus_agalactiae_2603V_R,
180 Lactobacillus_helveticus_DPC_4571,
181 Streptococcus_pyogenes_M1_GAS,
182 Mycobacterium_vanbaalenii_PYR_1,
183 Pseudomonas_putida_W619,
184 Mycoplasma_synoviae_53,
185 Francisella_tularensis_subsp._mediasiatica_FSC147,
186 Azoarcus_sp._BH72,
187 Pseudomonas_mendocina_ymp,
188 Wolbachia_endosymbiont_of_Drosophila_melanogaster,
189 Acinetobacter_baumannii_ACICU,
190 Alkaliphilus_oremlandii_OhILAs,
191 Flavobacterium_psychrophilum_JIP02_86,
192 Campylobacter_jejuni_subsp._jejuni_81116,
193 Frankia_sp._CcI3,
194 Bacillus_subtilis_subsp._subtilis_str._168,
195 Rickettsia_typhi_str._Wilmington,
196 Rickettsia_bellii_OSU_85_389,
197 Xanthomonas_axonopodis_pv._citri_str._306,
198 Haemophilus_influenzae_PittGG,
199 Methylococcus_capsulatus_str._Bath,
200 Brucella_melitensis_16M,
201 Bradyrhizobium_sp._ORS278,
202 Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1,
203 Prosthecochloris_vibrioformis_DSM_265,
204 'Synechococcus sp. JA-3-3Ab',
205 Arthrobacter_sp._FB24,
206 Synechocystis_sp._PCC_6803,
207 Burkholderia_sp._383,
208 Synechococcus_sp._RCC307,
209 Clostridium_botulinum_E3_str._Alaska_E43,
210 Bradyrhizobium_sp._BTAi1,
211 Oceanobacillus_iheyensis_HTE831,
212 Nitrosomonas_europaea_ATCC_19718,
213 Streptococcus_pneumoniae_R6,
214 Yersinia_pseudotuberculosis_IP_32953,
215 Bifidobacterium_longum_NCC2705,
216 Mycoplasma_pneumoniae_M129,
217 Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586,
218 Geobacter_metallireducens_GS_15,
219 Acidovorax_sp._JS42,
220 Mycoplasma_arthritidis_158L3_1,
221 Shewanella_baltica_OS185,
222 Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986,
223 Pelobacter_carbinolicus_DSM_2380,
224 Candidatus_Blochmannia_pennsylvanicus_str._BPEN,
225 Streptococcus_pneumoniae_TIGR4,
226 Thermotoga_petrophila_RKU_1,
227 Chlamydia_muridarum_Nigg,
228 Shigella_dysenteriae_Sd197,
229 Campylobacter_curvus_525_92,
230 Silicibacter_sp._TM1040,
231 Thermotoga_sp._RQ2,
232 Sphingopyxis_alaskensis_RB2256,
233 Pediococcus_pentosaceus_ATCC_25745,
234 Chlorobium_chlorochromatii_CaD3,
235 Corynebacterium_diphtheriae_NCTC_13129,
236 'Aster yellows witches''-broom phytoplasma AYWB',
237 Brucella_suis_1330,
238 Wolbachia_endosymbiont_strain_TRS_of_Brugia_malayi,
239 Streptococcus_suis_98HAH33,
240 Chlamydia_trachomatis_434_Bu,
241 Sorangium_cellulosum_So_ce_56,
242 Ehrlichia_chaffeensis_str._Arkansas,
243 Chloroherpeton_thalassium_ATCC_35110,
244 Mycobacterium_leprae_TN,
245 Helicobacter_pylori_J99,
246 Citrobacter_koseri_ATCC_BAA_895,
247 Caldicellulosiruptor_saccharolyticus_DSM_8903,
248 Alkalilimnicola_ehrlichei_MLHE_1,
249 Polynucleobacter_necessarius_STIR1,
250 Burkholderia_pseudomallei_1710b,
251 Streptococcus_pyogenes_SSI_1,
252 Methylobacillus_flagellatus_KT,
253 Mycobacterium_tuberculosis_H37Ra,
254 Yersinia_pestis_Pestoides_F,
255 Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842,
256 Mycobacterium_bovis_BCG_str._Pasteur_1173P2,
257 Chlamydia_trachomatis_L2b_UCH_1_proctitis,
258 Mycoplasma_gallisepticum_R,
259 Synechococcus_elongatus_PCC_7942,
260 Shewanella_amazonensis_SB2B,
261 Mycobacterium_ulcerans_Agy99,
262 Buchnera_aphidicola_str._APS_Acyrthosiphon_pisum,
263 Candidatus_Pelagibacter_ubique_HTCC1062,
264 Shewanella_sp._W3_18_1,
265 Geobacillus_kaustophilus_HTA426,
266 Streptomyces_avermitilis_MA_4680,
267 Shewanella_pealeana_ATCC_700345,
268 Chloroflexus_aurantiacus_J_10_fl,
269 Brucella_ovis_ATCC_25840,
270 Prochlorococcus_marinus_str._MIT_9312,
271 Escherichia_coli_SMS_3_5,
272 Chlamydia_trachomatis_A_HAR_13,
273 Yersinia_pestis_Antiqua,
274 Deinococcus_geothermalis_DSM_11300,
275 Arcobacter_butzleri_RM4018,
276 Staphylococcus_aureus_subsp._aureus_USA300_TCH1516,
277 Nostoc_sp._PCC_7120,
278 Legionella_pneumophila_str._Lens,
279 Erwinia_tasmaniensis,
280 Pseudomonas_aeruginosa_PA7,
281 Candidatus_Phytoplasma_mali,
282 Desulfotomaculum_reducens_MI_1,
283 Streptococcus_sanguinis_SK36,
284 Candidatus_Desulfococcus_oleovorans_Hxd3,
285 Lactobacillus_casei_ATCC_334,
286 Geobacter_lovleyi_SZ,
287 Borrelia_hermsii_DAH,
288 Lactobacillus_gasseri_ATCC_33323,
289 Lactococcus_lactis_subsp._cremoris_MG1363,
290 Pelodictyon_luteolum_DSM_273,
291 Caulobacter_sp._K31,
292 Coxiella_burnetii_RSA_331,
293 Roseiflexus_castenholzii_DSM_13941,
294 Colwellia_psychrerythraea_34H,
295 Paracoccus_denitrificans_PD1222,
296 Geobacter_sulfurreducens_PCA,
297 Rhodoferax_ferrireducens_T118,
298 Acaryochloris_marina_MBIC11017,
299 Methylobacterium_populi_BJ001,
300 Escherichia_coli_str._K12_substr_DH10B,
301 Prochlorococcus_marinus_str._MIT_9515,
302 Shewanella_baltica_OS195,
303 Chlamydophila_caviae_GPIC,
304 Staphylococcus_aureus_subsp._aureus_MRSA252,
305 Shewanella_frigidimarina_NCIMB_400,
306 Herminiimonas_arsenicoxydans,
307 Trichodesmium_erythraeum_IMS101,
308 Symbiobacterium_thermophilum_IAM_14863,
309 Clostridium_botulinum_A_str._Hall,
310 Campylobacter_jejuni_subsp._jejuni_NCTC_11168,
311 Tropheryma_whipplei_TW08_27,
312 Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305,
313 Vibrio_harveyi_ATCC_BAA_1116,
314 Acidovorax_avenae_subsp._citrulli_AAC00_1,
315 Mycobacterium_sp._KMS,
316 Azoarcus_sp._EbN1,
317 Frankia_sp._EAN1pec,
318 Clostridium_botulinum_B_str._Eklund_17B,
319 Lactobacillus_johnsonii_NCC_533,
320 Mycobacterium_tuberculosis_H37Rv,
321 Ehrlichia_canis_str._Jake,
322 Campylobacter_jejuni_RM1221,
323 Thermoanaerobacter_sp._X514,
324 Thermoanaerobacter_pseudethanolicus_ATCC_33223,
325 Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7,
326 Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2,
327 Tropheryma_whipplei_str._Twist,
328 Staphylococcus_aureus_subsp._aureus_NCTC_8325,
329 Synechococcus_sp._WH_8102,
330 Francisella_tularensis_subsp._tularensis_WY96_3418,
331 Burkholderia_pseudomallei_668,
332 Clostridium_novyi_NT,
333 Leifsonia_xyli_subsp._xyli_str._CTCB07,
334 Vibrio_vulnificus_CMCP6,
335 Prochlorococcus_marinus_str._MIT_9211,
336 Bacillus_thuringiensis_str._Al_Hakam,
337 Legionella_pneumophila_str._Paris,
338 Parabacteroides_distasonis_ATCC_8503,
339 'Leptospira borgpetersenii serovar Hardjo-bovis JB197',
340 Lactobacillus_sakei_subsp._sakei_23K,
341 Dinoroseobacter_shibae_DFL_12,
342 Synechococcus_sp._WH_7803,
343 Leptospira_biflexa_serovar_Patoc_strain_Patoc_1_Paris,
344 Listeria_monocytogenes_EGD_e,
345 Shewanella_putrefaciens_CN_32,
346 Shigella_flexneri_2a_str._301,
347 Vibrio_fischeri_ES114,
348 Shewanella_oneidensis_MR_1,
349 Actinobacillus_pleuropneumoniae_serovar_7_str._AP76,
350 Streptococcus_pyogenes_MGAS315,
351 Shigella_boydii_CDC_3083_94,
352 Dechloromonas_aromatica_RCB,
353 Alcanivorax_borkumensis_SK2,
354 Psychromonas_ingrahamii_37,
355 Prochlorococcus_marinus_str._NATL2A,
356 Rhizobium_leguminosarum_bv._viciae_3841,
357 Methylibium_petroleiphilum_PM1,
358 Pseudomonas_putida_GB_1,
359 Yersinia_pestis_CO92,
360 Neisseria_gonorrhoeae_NCCP11945,
361 Streptococcus_pyogenes_MGAS6180,
362 Rhodobacter_sphaeroides_2_4_1,
363 Leptothrix_cholodnii_sp._6,
364 Escherichia_coli_UTI89,
365 Shigella_flexneri_2a_str._2457T,
366 Jannaschia_sp._CCS1,
367 Rickettsia_bellii_RML369_C,
368 Candidatus_Sulcia_muelleri_GWSS,
369 Neisseria_meningitidis_FAM18,
370 Buchnera_aphidicola_str._Cc_Cinara_cedri,
371 Baumannia_cicadellinicola_str._Hc_Homalodisca_coagulata,
372 Moorella_thermoacetica_ATCC_39073,
373 Candidatus_Desulforudis_audaxviator_MP104C,
374 Chlamydophila_pneumoniae_AR39,
375 Staphylococcus_aureus_subsp._aureus_N315,
376 Clostridium_botulinum_A_str._ATCC_19397,
377 Escherichia_coli_536,
378 Orientia_tsutsugamushi_str._Ikeda,
379 Bordetella_pertussis_Tohama_I,
380 Francisella_tularensis_subsp._holarctica,
381 Brucella_canis_ATCC_23365,
382 Streptococcus_pyogenes_MGAS5005,
383 Pasteurella_multocida_subsp._multocida_str._Pm70,
384 Francisella_philomiragia_subsp._philomiragia_ATCC_25017,
385 Streptococcus_agalactiae_NEM316,
386 Idiomarina_loihiensis_L2TR,
387 Brucella_abortus_S19,
388 Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1_130,
389 Rickettsia_massiliae_MTU5,
390 Gluconobacter_oxydans_621H,
391 Propionibacterium_acnes_KPA171202,
392 Mesorhizobium_loti_MAFF303099,
393 Clavibacter_michiganensis_subsp._sepedonicus,
394 Flavobacterium_johnsoniae_UW101,
395 Pelotomaculum_thermopropionicum_SI,
396 Aeromonas_salmonicida_subsp._salmonicida_A449,
397 Ralstonia_eutropha_H16,
398 Streptococcus_mutans_UA159,
399 Burkholderia_xenovorans_LB400,
400 Bacillus_pumilus_SAFR_032,
401 Acinetobacter_baumannii_ATCC_17978,
402 Granulibacter_bethesdensis_CGDNIH1,
403 'Leptospira borgpetersenii serovar Hardjo-bovis L550',
404 Verminephrobacter_eiseniae_EF01_2,
405 Vibrio_cholerae_O1_biovar_eltor_str._N16961,
406 Anabaena_variabilis_ATCC_29413,
407 Bacillus_licheniformis_ATCC_14580,
408 Rhodopseudomonas_palustris_CGA009,
409 Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA_365,
410 Burkholderia_phymatum_STM815,
411 Lactobacillus_fermentum_IFO_3956,
412 Clostridium_botulinum_A3_str._Loch_Maree,
413 Mycobacterium_gilvum_PYR_GCK,
414 Thermosipho_melanesiensis_BI429,
415 Nitrosococcus_oceani_ATCC_19707,
416 Brucella_suis_ATCC_23445,
417 Salinibacter_ruber_DSM_13855,
418 Chlamydophila_pneumoniae_CWL029,
419 Synechococcus_sp._CC9311,
420 Chlamydophila_abortus_S26_3,
421 Burkholderia_mallei_NCTC_10247,
422 Neorickettsia_sennetsu_str._Miyayama,
423 Lactococcus_lactis_subsp._cremoris_SK11,
424 Pelobacter_propionicus_DSM_2379,
425 Bacillus_cereus_subsp._cytotoxis_NVH_391_98,
426 Erythrobacter_litoralis_HTCC2594,
427 Orientia_tsutsugamushi_Boryong,
428 Burkholderia_pseudomallei_1106a,
429 Dehalococcoides_sp._BAV1,
430 Cyanothece_sp._ATCC_51142,
431 Ralstonia_eutropha_JMP134,
432 Staphylococcus_aureus_subsp._aureus_JH1,
433 Burkholderia_thailandensis_E264,
434 Acidobacteria_bacterium_Ellin345,
435 Pseudomonas_syringae_pv._syringae_B728a,
436 Prochlorococcus_marinus_str._MIT_9215,
437 Synechococcus_sp._CC9605,
438 Rhodobacter_sphaeroides_ATCC_17029,
439 Bordetella_petrii_DSM_12804,
440 Streptococcus_pneumoniae_Hungary19A_6,
441 Yersinia_pestis_Nepal516,
442 Listeria_innocua_Clip11262,
443 Chlorobium_limicola_DSM_245,
444 Escherichia_coli_HS,
445 Xylella_fastidiosa_M23,
446 Anaplasma_marginale_str._St_Maries,
447 Pseudomonas_stutzeri_A1501,
448 Rhodopseudomonas_palustris_BisB5,
449 Lactobacillus_brevis_ATCC_367,
450 Helicobacter_pylori_Shi470,
451 Yersinia_pseudotuberculosis_YPIII,
452 Nitratiruptor_sp._SB155_2,
453 Saccharopolyspora_erythraea_NRRL_2338,
454 Polaromonas_naphthalenivorans_CJ2,
455 Sulfurovum_sp._NBC37_1,
456 Vibrio_parahaemolyticus_RIMD_2210633,
457 Saccharophagus_degradans_2_40,
458 Silicibacter_pomeroyi_DSS_3,
459 Herpetosiphon_aurantiacus_ATCC_23779,
460 Rickettsia_rickettsii_str._Iowa,
461 Ureaplasma_parvum_serovar_3_str._ATCC_27815,
462 Synechococcus_sp._CC9902,
463 Streptococcus_pyogenes_MGAS9429,
464 Nitrobacter_hamburgensis_X14,
465 Salinispora_arenicola_CNS_205,
466 Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18,
467 Lactobacillus_casei_BL23,
468 Methylobacterium_sp._4_46,
469 Burkholderia_cenocepacia_AU_1054,
470 Streptococcus_pneumoniae_D39,
471 Pseudomonas_putida_F1,
472 Rhodobacter_sphaeroides_ATCC_17025,
473 Pseudomonas_putida_KT2440,
474 Thermosynechococcus_elongatus_BP_1,
475 Shewanella_baltica_OS155,
476 Kocuria_rhizophila_DC2201,
477 Legionella_pneumophila_str._Corby,
478 Ehrlichia_ruminantium_str._Welgevonden,
479 Candidatus_Blochmannia_floridanus,
480 Staphylococcus_epidermidis_ATCC_12228,
481 Frankia_alni_ACN14a,
482 Ralstonia_solanacearum_GMI1000,
483 Ralstonia_metallidurans_CH34,
484 Burkholderia_mallei_NCTC_10229,
485 Helicobacter_hepaticus_ATCC_51449,
486 Corynebacterium_glutamicum_ATCC_13032,
487 Burkholderia_vietnamiensis_G4,
488 Dehalococcoides_sp._CBDB1,
489 Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578,
490 Shewanella_denitrificans_OS217,
491 'Anaeromyxobacter sp. Fw109-5',
492 Chromobacterium_violaceum_ATCC_12472,
493 Rickettsia_canadensis_str._McKiel,
494 Alkaliphilus_metalliredigenes_QYMF,
495 Clostridium_perfringens_str._13,
496 Xanthobacter_autotrophicus_Py2,
497 Bordetella_parapertussis_12822,
498 Shewanella_halifaxensis_HAW_EB4,
499 Yersinia_pestis_biovar_Microtus_str._91001,
500 Renibacterium_salmoninarum_ATCC_33209,
501 Clostridium_beijerinckii_NCIMB_8052,
502 Salmonella_typhimurium_LT2,
503 Candidatus_Amoebophilus_asiaticus_5a2,
504 Lysinibacillus_sphaericus_C3_41,
505 Natranaerobius_thermophilus_JW_NM_WN_LF,
506 Xanthomonas_oryzae_pv._oryzae_KACC10331,
507 Parvibaculum_lavamentivorans_DS_1,
508 Shewanella_sediminis_HAW_EB3,
509 Pseudomonas_entomophila_L48,
510 Leptospira_interrogans_serovar_Lai_str._56601,
511 Rickettsia_conorii_str._Malish_7,
512 Streptococcus_thermophilus_LMG_18311,
513 Bradyrhizobium_japonicum_USDA_110,
514 Yersinia_pestis_KIM,
515 Prochlorococcus_marinus_str._AS9601,
516 Synechococcus_elongatus_PCC_6301,
517 Syntrophobacter_fumaroxidans_MPOB,
518 Chlorobium_tepidum_TLS,
519 Haemophilus_ducreyi_35000HP,
520 Burkholderia_ambifaria_MC40_6,
521 Staphylococcus_aureus_RF122,
522 Janthinobacterium_sp._Marseille,
523 Mycobacterium_tuberculosis_F11,
524 Serratia_proteamaculans_568,
525 Bordetella_avium_197N,
526 Lactobacillus_reuteri_F275,
527 Rhodococcus_sp._RHA1,
528 Prochlorococcus_marinus_str._MIT_9303,
529 Delftia_acidovorans_SPH_1,
530 Nitrosospira_multiformis_ATCC_25196,
531 Xylella_fastidiosa_M12,
532 Lactobacillus_acidophilus_NCFM,
533 Staphylococcus_aureus_subsp._aureus_COL,
534 Acinetobacter_sp._ADP1,
535 Mycobacterium_bovis_AF2122_97,
536 Caulobacter_crescentus_CB15,
537 Staphylococcus_aureus_subsp._aureus_JH9,
538 Thiomicrospira_crunogena_XCL_2,
539 Arthrobacter_aurescens_TC1,
540 Thermobifida_fusca_YX,
541 Thermotoga_lettingae_TMO,
542 Xanthomonas_oryzae_pv._oryzae_MAFF_311018,
543 Clostridium_botulinum_F_str._Langeland,
544 Acidothermus_cellulolyticus_11B,
545 Leptospira_biflexa_serovar_Patoc_strain_Patoc_1_Ames,
546 Lactobacillus_plantarum_WCFS1,
547 Mycobacterium_avium_subsp._paratuberculosis_K_10,
548 Vibrio_cholerae_O395,
549 Methylobacterium_extorquens_PA1,
550 'Brucella abortus biovar 1 str. 9-941',
551 Yersinia_pestis_Angola,
552 Oenococcus_oeni_PSU_1,
553 Shigella_flexneri_5_str._8401,
554 Staphylococcus_aureus_subsp._aureus_str._Newman,
555 Streptococcus_pyogenes_MGAS10270,
556 Deinococcus_radiodurans_R1,
557 'Synechococcus sp. JA-2-3B''a(2-13)',
558 Thermoanaerobacter_tengcongensis_MB4,
559 Streptococcus_thermophilus_LMD_9,
560 Escherichia_coli_E24377A,
561 Acinetobacter_baumannii_AYE,
562 Francisella_tularensis_subsp._tularensis_FSC198,
563 Lactobacillus_salivarius_UCC118,
564 Porphyromonas_gingivalis_ATCC_33277,
565 Marinomonas_sp._MWYL1,
566 Streptomyces_griseus_subsp._griseus_NBRC_13350,
567 Clostridium_acetobutylicum_ATCC_824,
568 Wolbachia_pipientis,
569 Chlorobium_phaeobacteroides_BS1,
570 Synechococcus_sp._PCC_7002,
571 Bartonella_bacilliformis_KC583,
572 Desulfotalea_psychrophila_LSv54,
573 Streptomyces_coelicolor_A3_2,
574 Escherichia_coli_CFT073,
575 Wolinella_succinogenes_DSM_1740,
576 Psychrobacter_cryohalolentis_K5,
577 Bordetella_bronchiseptica_RB50,
578 Buchnera_aphidicola_str._Sg_Schizaphis_graminum,
579 Desulfovibrio_desulfuricans_subsp._desulfuricans_str._G20,
580 Corynebacterium_glutamicum_R,
581 Rubrobacter_xylanophilus_DSM_9941,
582 'Magnetococcus sp. MC-1',
583 Pseudomonas_fluorescens_Pf_5,
584 Bartonella_quintana_str._Toulouse,
585 Polaromonas_sp._JS666,
586 Pseudomonas_syringae_pv._phaseolicola_1448A,
587 Staphylococcus_aureus_subsp._aureus_MSSA476,
588 Rickettsia_prowazekii_str._Madrid_E,
589 Rickettsia_rickettsii_str._Sheila_Smith,
590 'Bacillus thuringiensis serovar konkukian str. 97-27',
591 Streptococcus_pyogenes_MGAS2096,
592 Neisseria_meningitidis_053442,
593 Clostridium_perfringens_ATCC_13124,
594 Desulfovibrio_vulgaris_subsp._vulgaris_DP4,
595 Escherichia_coli_O157_H7_EDL933,
596 Mesoplasma_florum_L1,
597 Escherichia_coli_ATCC_8739,
598 Marinobacter_aquaeolei_VT8,
599 Staphylococcus_aureus_subsp._aureus_Mu50,
600 Streptococcus_gordonii_str._Challis_substr_CH1,
601 Francisella_tularensis_subsp._holarctica_FTNF002_00,
602 Ureaplasma_parvum_serovar_3_str._ATCC_700970,
603 Francisella_tularensis_subsp._tularensis_SCHU_S4,
604 Actinobacillus_pleuropneumoniae_L20,
605 Corynebacterium_urealyticum_DSM_7109,
606 Porphyromonas_gingivalis_W83,
607 Zymomonas_mobilis_subsp._mobilis_ZM4,
608 Chlorobium_phaeobacteroides_DSM_266,
609 Treponema_denticola_ATCC_35405,
610 Listeria_welshimeri_serovar_6b_str._SLCC5334,
611 Prochlorococcus_marinus_str._MIT_9301,
612 Rhodospirillum_rubrum_ATCC_11170,
613 Bacteroides_thetaiotaomicron_VPI_5482,
614 Borrelia_garinii_PBi,
615 Bifidobacterium_adolescentis_ATCC_15703,
616 Thiobacillus_denitrificans_ATCC_25259,
617 Haemophilus_influenzae_Rd_KW20,
618 Mesorhizobium_sp._BNC1,
619 Rhodopseudomonas_palustris_TIE_1,
620 Pseudomonas_syringae_pv._tomato_str._DC3000,
621 'Shewanella sp. MR-4',
622 Staphylococcus_epidermidis_RP62A,
623 Mycobacterium_abscessus,
624 'Campylobacter fetus subsp. fetus 82-40',
625 Aquifex_aeolicus_VF5,
626 Photobacterium_profundum_SS9,
627 Thermus_thermophilus_HB8,
628 Salinispora_tropica_CNB_440,
629 Burkholderia_mallei_SAVP1,
630 Ralstonia_pickettii_12J,
631 Salmonella_enterica_subsp._arizonae_serovar_62_z4_z23,
632 Nocardioides_sp._JS614,
633 Clostridium_perfringens_SM101,
634 Magnetospirillum_magneticum_AMB_1,
635 Shigella_boydii_Sb227,
636 Roseobacter_denitrificans_OCh_114,
637 Clostridium_botulinum_A_str._ATCC_3502,
638 Ochrobactrum_anthropi_ATCC_49188,
639 Mycoplasma_hyopneumoniae_J,
640 Novosphingobium_aromaticivorans_DSM_12444,
641 Clostridium_phytofermentans_ISDg,
642 Cytophaga_hutchinsonii_ATCC_33406,
643 Chlamydophila_felis_Fe_C_56,
644 Dichelobacter_nodosus_VCS1703A,
645 Bacillus_weihenstephanensis_KBAB4,
646 Cupriavidus_taiwanensis,
647 Bacillus_anthracis_str._Sterne,
648 Sinorhizobium_meliloti_1021,
649 Chlamydia_trachomatis_D_UW_3_CX,
650 Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966,
651 Rickettsia_felis_URRWXCal2,
652 Shigella_sonnei_Ss046,
653 Nitrobacter_winogradskyi_Nb_255,
654 Bartonella_henselae_str._Houston_1,
655 Burkholderia_pseudomallei_K96243,
656 Yersinia_pseudotuberculosis_IP_31758,
657 Prochlorococcus_marinus_subsp._marinus_str._CCMP1375,
658 Prochlorococcus_marinus_str._NATL1A,
659 Solibacter_usitatus_Ellin6076,
660 Gluconacetobacter_diazotrophicus_PAl_5,
661 Neisseria_gonorrhoeae_FA_1090,
662 Xanthomonas_oryzae_pv._oryzae_PXO99A,
663 Erwinia_carotovora_subsp._atroseptica_SCRI1043,
664 Cellvibrio_japonicus_Ueda107,
665 Fervidobacterium_nodosum_Rt17_B1,
666 Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293,
667 Bacillus_clausii_KSM_K16,
668 Stenotrophomonas_maltophilia_K279a,
669 Shewanella_woodyi_ATCC_51908,
670 Beijerinckia_indica_subsp._indica_ATCC_9039,
671 Rhizobium_etli_CIAT_652,
672 Myxococcus_xanthus_DK_1622,
673 Enterobacter_sp._638,
674 Treponema_pallidum_subsp._pallidum_str._Nichols,
675 Sodalis_glossinidius_str._morsitans,
676 Lactococcus_lactis_subsp._lactis_Il1403,
677 Dehalococcoides_ethenogenes_195,
678 Bacillus_cereus_ATCC_10987,
679 Haemophilus_somnus_2336,
680 Streptococcus_pneumoniae_CGSP14,
681 Campylobacter_jejuni_subsp._doylei_269_97,
682 Mycobacterium_avium_104,
683 Rhodopirellula_baltica_SH_1,
684 Syntrophus_aciditrophicus_SB,
685 Corynebacterium_jeikeium_K411,
686 Campylobacter_jejuni_subsp._jejuni_81_176,
687 Streptococcus_pyogenes_MGAS10750,
688 Psychrobacter_arcticus_273_4,
689 Sulfurimonas_denitrificans_DSM_1251,
690 Halorhodospira_halophila_SL1,
691 Nitrosomonas_eutropha_C91,
692 Sulfurihydrogenibium_sp._YO3AOP1,
693 Bacteroides_fragilis_NCTC_9343,
694 Escherichia_coli_APEC_O1,
695 Haemophilus_influenzae_PittEE,
696 Thermus_thermophilus_HB27,
697 Acholeplasma_laidlawii_PG_8A,
698 Carboxydothermus_hydrogenoformans_Z_2901,
699 Bdellovibrio_bacteriovorus_HD100,
700 Photorhabdus_luminescens_subsp._laumondii_TTO1,
701 'Shewanella sp. MR-7',
702 Mycoplasma_pulmonis_UAB_CTIP,
703 Bacteroides_fragilis_YCH46,
704 'Roseiflexus sp. RS-1',
705 Escherichia_coli_str._K12_substr_MG1655,
706 Streptococcus_pyogenes_MGAS8232,
707 Xanthomonas_campestris_pv._vesicatoria_str._85_10,
708 Elusimicrobium_minutum_Pei191,
709 Enterobacter_sakazakii_ATCC_BAA_894,
710 Burkholderia_cenocepacia_HI2424,
711 Rickettsia_akari_str._Hartford,
712 Streptococcus_pyogenes_MGAS10394,
713 Heliobacterium_modesticaldum_Ice1,
714 Campylobacter_hominis_ATCC_BAA_381,
715 Bacillus_anthracis_str._Ames_Ancestor,
716 Rhodopseudomonas_palustris_HaA2,
717 Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen,
718 Helicobacter_pylori_HPAG1,
719 Pseudomonas_aeruginosa_PAO1,
720 Listeria_monocytogenes_str._4b_F2365;
TREE phyml = [&R] (((((43:0.190689,46:0.263143):0.276658,((((((((((((((((((((((((((((((((((((((((133:0.0,705:0.0):1.51E-4,300:0.0):2.0E-5,(597:1.7E-4,444:1.71E-4):1.7E-4):0.0,(377:0.001196,694:0.0):0.0):0.0,((346:0.001883,365:0.0):1.71E-4,553:3.44E-4):5.12E-4):0.0,(351:5.13E-4,635:8.57E-4):3.42E-4):0.0,271:0.0):0.0,595:0.0):0.0,574:0.0):0.0,364:0.0):0.0,560:0.0):0.0,228:0.001025):1.69E-4,652:0.001028):0.012167,(((((((326:0.0,466:1.7E-4):3.4E-4,502:0.0):0.0,94:8.5E-4):2.0E-6,325:1.8E-4):1.69E-4,56:3.48E-4):0.001774,631:0.001673):0.008533,246:0.007106):0.003103):0.00437,489:0.012094):0.004392,709:0.019781):0.007021,673:0.019532):0.027075,(279:0.033979,524:0.033607):0.013319):0.008604,663:0.03122):0.012206,((((((514:0.0,656:0.0):0.0,359:0.0):0.0,214:0.0):0.0,((((142:0.0,254:0.0):0.0,(451:0.0,441:0.0):0.0):0.0,273:1.72E-4):0.0,499:0.0):0.0):0.0,551:3.44E-4):0.00575,135:0.009468):0.030284):0.008222,((((224:0.111832,479:0.199319):0.14508,(((262:0.081646,578:0.078489):0.090786,177:0.232468):0.043831,(137:0.30099,370:0.303142):0.063766):0.064196):0.054991,371:0.166451):0.081445,675:0.026696):0.024889):0.01239,700:0.048195):0.050763,((((72:9.73E-4,679:7.28E-4):0.038446,383:0.033371):0.011204,((64:0.02899,63:0.035825):0.013874,(((617:0.002043,198:0.00105):5.49E-4,95:5.15E-4):2.24E-4,695:0.001026):0.040304):0.008478):0.011217,(((604:0.00137,349:3.39E-4):1.74E-4,111:0.003062):0.011765,519:0.024577):0.038512):0.080775):0.047571,(((((405:3.64E-4,548:8.38E-4):0.041305,(334:5.27E-4,99:1.72E-4):0.020829):0.011445,(456:0.00625,313:0.010839):0.011481):0.027253,347:0.05376):0.027779,626:0.072105):0.054993):0.023142,(650:0.006284,396:0.0108):0.109795):0.020707,((((((498:0.008905,267:0.003805):0.025082,(508:0.019306,669:0.012326):0.017175):0.016987,105:0.021173):0.024752,((((((140:0.002092,621:9.8E-4):7.54E-4,701:3.48E-4):0.003036,348:0.002265):0.010027,(264:3.26E-4,345:1.85E-4):0.001996):0.006463,((475:0.001236,302:0.0):5.23E-4,221:6.84E-4):0.009966):0.015626,(490:0.017657,305:0.02512):0.022711):0.020469):0.018183,260:0.035265):0.092511,354:0.170059):0.021406):0.025447,((386:0.129215,84:0.121204):0.026755,(118:0.120366,294:0.144993):0.031198):0.015669):0.082415,45:0.172853):0.0486,((((((189:8.84E-4,401:0.003413):5.27E-4,(75:8.48E-4,561:1.7E-4):0.0):0.020056,534:0.027905):0.107102,((688:0.006888,576:0.006086):0.066403,70:0.060503):0.121017):0.15381,353:0.175254):0.040455,(((157:0.167612,565:0.175719):0.038094,(598:0.1125,145:0.130701):0.053467):0.019075,(((((((((435:0.001801,586:0.002321):0.002597,620:0.003918):0.02921,583:0.014609):0.00751,130:0.010753):0.026949,((((473:1.71E-4,471:0.0):0.001622,358:0.003034):0.003248,183:0.007868):0.003675,509:0.007306):0.02498):0.030505,187:0.030084):0.018411,447:0.035067):0.021645,((719:0.0,126:1.71E-4):0.001113,280:0.001132):0.032184):0.118537,(457:0.107494,664:0.109149):0.090952):0.024456):0.029903):0.041423):0.029921,(((477:0.001506,202:5.43E-4):3.1E-4,(278:0.00222,337:0.001831):3.76E-4):0.255271,((292:0.00102,154:5.1E-4):0.001141,60:0.001413):0.286937):0.063734):0.020357,((((((((603:0.0,562:0.0):0.001507,330:3.35E-4):3.34E-4,((134:0.0,380:5.02E-4):0.0,601:3.35E-4):0.002852):0.0,185:0.002516):0.001333,69:6.81E-4):0.02679,384:0.028537):0.343835,644:0.35117):0.058577,((110:0.048117,170:0.070088):0.299069,538:0.218606):0.069384):0.027865):0.019953,(((690:0.175731,248:0.10505):0.103584,415:0.225193):0.031953,((((((178:3.43E-4,90:5.15E-4):3.45E-4,89:1.7E-4):0.006192,(((506:1.75E-4,542:0.0):0.0,662:0.002957):0.008947,(707:0.001996,197:0.00127):0.004934):0.005782):0.031343,668:0.060056):0.030521,(((445:0.0,103:1.74E-4):0.005446,531:0.003419):0.005622,96:0.003688):0.09616):0.251782,199:0.208011):0.028921):0.02517):0.056558,((((((212:0.04084,691:0.04959):0.144982,530:0.08516):0.076439,616:0.145726):0.023371,252:0.155554):0.027233,(((186:0.052172,316:0.058776):0.062917,352:0.113139):0.05407,((((((115:0.011,249:0.023235):0.136644,((((646:0.005601,397:0.005264):0.006279,431:0.007605):0.010799,483:0.013934):0.029247,(482:0.02203,630:0.021784):0.025195):0.037629):0.022794,(((159:0.004098,399:0.002629):0.017129,410:0.017185):0.015186,(((((168:0.001201,520:1.65E-4):0.00415,(((469:0.0,710:1.71E-4):1.71E-4,91:0.0):0.002317,207:0.007333):0.002889):0.00261,487:0.003346):0.015421,158:0.005208):0.005853,((((((((421:0.0,484:1.72E-4):3.43E-4,113:1.91E-4):0.0,629:0.0):1.71E-4,655:5.16E-4):0.0,250:0.0):0.0,331:0.0):0.0,428:1.71E-4):0.004036,433:0.005011):0.007936):0.019911):0.063072):0.026718,(306:0.021781,522:0.013485):0.104015):0.024622,((357:0.071447,363:0.085431):0.041536,((((529:0.061373,219:0.025396):0.016116,314:0.025052):0.01365,404:0.072504):0.026641,((454:0.031581,585:0.022265):0.044515,297:0.06856):0.022175):0.065841):0.119404):0.025568,((((577:1.72E-4,497:0.001377):1.18E-4,379:0.001433):0.021534,525:0.031614):0.010355,439:0.021324):0.132685):0.071258):0.027059):0.037078,(((661:5.0E-4,360:0.001485):0.006103,(((79:0.001366,172:0.00101):7.87E-4,369:0.001575):5.57E-4,592:0.002602):0.001738):0.167934,492:0.09855):0.087498):0.124859):0.205339,(((((((((((((671:0.003437,151:0.005094):0.006043,356:0.011645):0.036083,127:0.045233):0.016839,(648:0.006124,160:0.006258):0.029756):0.070623,(((((654:0.020444,584:0.029388):0.009808,131:0.025338):0.031387,571:0.065286):0.098029,(((((381:6.88E-4,237:1.72E-4):6.89E-4,416:0.001033):0.0,(((387:1.76E-4,85:1.72E-4):0.0,550:0.0):6.84E-4,200:0.002611):1.71E-4):0.0,269:0.001206):0.013975,638:0.01275):0.047742):0.034988,(392:0.077568,618:0.07419):0.027327):0.021349):0.086016,((((((549:0.011368,299:0.004799):0.03256,109:0.045067):0.041026,468:0.058056):0.074338,670:0.149061):0.026115,(496:0.058512,119:0.044976):0.079042):0.02072,((((201:0.007711,210:0.006207):0.029183,513:0.033032):0.020122,(((619:0.0,408:3.43E-4):0.030733,(448:0.012815,716:0.011805):0.010984):0.018577,(67:0.037297,155:0.031869):0.014739):0.023424):0.01122,(653:0.018532,464:0.017835):0.041031):0.111343):0.056949):0.041219,507:0.17312):0.029751,((98:0.176054,167:0.253873):0.037937,(291:0.046364,536:0.03404):0.177012):0.067981):0.024054,(((((458:0.054186,230:0.048369):0.026318,636:0.076151):0.022514,366:0.099178):0.015502,341:0.062324):0.048422,(((438:3.54E-4,362:7.92E-4):0.0133,472:0.013986):0.076691,295:0.091793):0.030158):0.202704):0.030795,(((640:0.086704,426:0.121244):0.045873,232:0.085216):0.03517,(152:0.074921,607:0.113715):0.03071):0.187787):0.027917,((612:0.169238,634:0.125062):0.055149,(((390:0.101123,660:0.059111):0.060663,402:0.085514):0.032014,165:0.120348):0.145099):0.055072):0.09899,(((((367:6.4E-4,196:6.24E-4):0.053585,(((195:0.015422,588:0.012042):0.039247,((651:0.00684,711:0.024586):0.00502,(((460:0.0,589:0.0):0.00663,511:0.002765):0.00386,389:0.00794):0.008218):0.002179):0.00446,493:0.030982):0.03239):0.199956,(427:0.012903,378:0.003049):0.386268):0.180586,((((123:0.123173,446:0.120008):0.159306,((149:0.002292,478:0.002453):0.053871,(321:0.027749,242:0.027236):0.031378):0.134774):0.151991,((568:0.072061,188:0.04265):0.018425,238:0.077353):0.269684):0.141145,422:0.697366):0.171539):0.064736,263:0.549831):0.056614):0.089191,582:0.339568):0.063213):0.093791,((434:0.221486,659:0.235193):0.269435,((((((296:0.05188,218:0.04331):0.045927,54:0.08407):0.035503,(424:0.107415,286:0.104313):0.062144):0.11137,223:0.218315):0.102231,(((((((594:2.75E-4,58:2.47E-4):0.096556,579:0.130391):0.041935,73:0.194671):0.108731,(32:0.206905,40:0.21572):0.039647):0.204436,572:0.368324):0.05185,(284:0.325853,517:0.267991):0.045811):0.045242,684:0.335728):0.039815):0.036306,(((241:0.340758,23:0.326975):0.069132,((491:0.05281,87:0.046187):0.14976,672:0.199974):0.121235):0.065096,699:0.487944):0.045793):0.04331):0.033782):0.033693,37:0.52279):0.036282,(((((((689:0.23347,275:0.208618):0.040632,455:0.230443):0.030751,(((((310:0.001263,322:9.27E-4):6.61E-4,((681:0.006051,192:3.16E-4):0.001123,686:9.26E-4):3.5E-4):0.119606,((229:0.03145,107:0.037212):0.061724,624:0.097271):0.023098):0.020182,714:0.16927):0.075991,5:0.136694):0.07072):0.026032,((((((718:0.003032,153:0.004293):9.24E-4,450:0.004956):0.002035,245:0.00625):0.008252,92:0.010673):0.199339,485:0.121696):0.062387,575:0.107844):0.108511):0.052813,452:0.132215):0.401479,(625:0.291771,692:0.270137):0.202377):0.049843,708:0.667875):0.034753):0.023181,(((((((4:0.115999,19:0.124662):0.074785,642:0.182703):0.054101,503:0.332349):0.041954,((26:0.181859,11:0.30193):0.037197,(((((191:0.059237,394:0.052582):0.072716,129:0.133872):0.034419,10:0.123672):0.087924,368:0.665368):0.057908,((((703:0.0,693:0.0):0.024113,613:0.02726):0.02733,71:0.051865):0.063951,((564:8.58E-4,606:0.001013):0.151787,338:0.06466):0.046245):0.18136):0.057273):0.041539):0.194704,(48:0.154571,417:0.312844):0.159944):0.062353,((((518:0.032082,100:0.032712):0.058237,(((203:0.059493,290:0.0478):0.035359,234:0.105899):0.014378,(443:0.051253,608:0.062034):0.016101):0.038256):0.042465,569:0.115118):0.129491,243:0.162073):0.253695):0.148638,((((122:0.396966,120:0.451463):0.059359,102:0.427955):0.105972,(((((649:0.002254,272:0.002736):0.004197,(240:0.0,257:3.44E-4):0.002396):0.021326,227:0.019605):0.087368,(((420:0.030285,303:0.023437):0.007338,643:0.022986):0.042096,((374:0.0,121:1.71E-4):1.71E-4,(418:3.42E-4,78:3.44E-4):0.0):0.088464):0.034515):0.269463,136:0.26373):0.294159):0.072779,(683:0.328464,14:0.334605):0.359784):0.051776):0.041976):0.020277,((((((74:0.011852,614:0.016443):0.006519,104:0.013496):0.093741,287:0.090331):0.391295,((101:0.0,674:0.0):0.267368,609:0.151221):0.231493):0.155836,25:0.52097):0.062841,(((403:2.2E-4,339:0.0):0.017229,(510:1.81E-4,388:8.38E-4):0.020842):0.144917,(343:0.0,545:1.71E-4):0.165532):0.395767):0.1053):0.036183,((((((((639:0.002353,55:0.003734):0.002271,171:0.003699):0.430983,((((184:0.261036,163:0.263813):0.099129,702:0.278073):0.046282,220:0.383762):0.035874,138:0.328229):0.046689):0.262618,(((602:1.66E-4,461:0.0):0.453388,117:0.366678):0.056306,((216:0.106972,108:0.117431):0.32371,258:0.299834):0.137813):0.242873):0.06613,((150:0.018411,83:0.013116):0.146931,596:0.163211):0.286922):0.11052,(((106:0.016914,236:0.018909):0.202409,281:0.277597):0.160881,697:0.249163):0.180723):0.122978,(((33:0.173665,49:0.08471):0.045217,38:0.115851):0.114134,217:0.22874):0.263641):0.093021,((((((((173:0.199501,713:0.161842):0.040662,372:0.189602):0.025151,((((282:0.141921,24:0.173079):0.026808,395:0.119406):0.031051,373:0.239396):0.041262,698:0.192197):0.033883):0.022877,717:0.340927):0.029485,308:0.302816):0.024169,(505:0.328273,28:0.318108):0.03302):0.020798,((((((((((((((590:3.38E-4,336:1.69E-4):1.69E-4,((647:0.0,715:0.0):0.0,97:0.0):0.001183):6.51E-4,57:5.32E-4):0.001131,(161:0.002251,645:0.013987):0.004118):0.001515,678:2.57E-4):0.020967,425:0.013733):0.085584,(((194:0.015012,65:0.015183):0.020109,400:0.040049):0.011797,407:0.023456):0.065389):0.021459,(116:0.011367,265:0.01873):0.094956):0.020796,((((((((148:0.0,599:1.67E-4):1.67E-4,375:1.67E-4):0.0,(537:0.001001,432:0.0):3.34E-4):5.16E-4,(((304:6.67E-4,521:3.35E-4):0.0,(((328:6.77E-4,276:0.0):0.0,82:0.0):0.0,(533:6.68E-4,554:3.33E-4):3.34E-4):1.67E-4):0.0,(587:0.0,174:0.0):3.34E-4):1.51E-4):0.032187,((480:3.35E-4,622:1.66E-4):0.023543,176:0.025193):0.012868):0.014679,312:0.045225):0.208482,((((((((((251:1.69E-4,350:3.35E-4):3.86E-4,(((((181:3.34E-4,382:1.67E-4):3.34E-4,(((706:6.78E-4,687:8.62E-4):1.67E-4,86:5.01E-4):3.34E-4,712:5.01E-4):0.0):1.67E-4,(463:5.01E-4,591:0.0):5.01E-4):0.0,555:5.09E-4):3.34E-4,361:5.01E-4):2.83E-4):0.032705,((179:5.02E-4,141:0.0):5.02E-4,385:0.0):0.032531):0.009744,((512:4.96E-4,61:6.75E-4):0.001002,559:8.46E-4):0.042346):0.010989,398:0.053241):0.014154,((239:1.41E-4,166:0.003069):0.045053,((((470:0.0,213:0.0):0.001089,(225:7.57E-4,680:0.001274):5.04E-4):1.79E-4,440:5.78E-4):0.025464,(600:0.013866,283:0.013168):0.014048):0.01685):0.015608):0.079689,((423:0.001565,289:8.56E-4):0.005333,676:0.005458):0.157584):0.124114,88:0.096988):0.030082,(((((532:0.017053,180:0.025039):0.047802,(288:0.008251,319:0.00468):0.081515):0.035749,(409:0.001075,255:9.47E-4):0.095385):0.189762,((467:1.67E-4,285:1.71E-4):0.13496,340:0.116042):0.029638):0.037981,(((((449:0.113171,546:0.09989):0.023598,233:0.140539):0.018317,(411:0.075472,526:0.062813):0.114981):0.022679,((666:0.031056,125:0.035589):0.124121,552:0.234536):0.131959):0.021585,563:0.124879):0.034651):0.077386):0.111668,(((344:0.00208,720:7.75E-4):0.001511,610:0.003974):0.001047,442:0.001031):0.107265):0.033808):0.044404,504:0.152339):0.036331):0.021337,211:0.18896):0.019902,(667:0.093196,62:0.066964):0.053506):0.027554,124:0.211271):0.115095,3:0.223192):0.06559,(((((567:0.123954,332:0.114099):0.023517,((((593:5.13E-4,495:0.001376):4.86E-4,633:0.00102):0.09186,((209:0.003782,318:0.003812):0.055674,501:0.067314):0.054513):0.057627,((((((637:0.0,376:0.0):0.0,309:1.67E-4):0.001673,(543:0.001211,139:0.003486):0.001309):0.001791,412:0.007218):0.098641,81:0.121865):0.020585,66:0.115493):0.020236):0.012084):0.136573,641:0.312208):0.036695,((18:0.28787,112:0.211317):0.173769,((494:0.12868,190:0.107044):0.082634,143:0.211875):0.045791):0.027696):0.039355,((((324:0.004904,323:0.004594):0.034053,558:0.041493):0.149566,247:0.23409):0.036154,169:0.176618):0.036512):0.061826):0.019474):0.069313,((((((((((((((27:0.064063,9:0.099947):0.030002,44:0.094672):0.01975,15:0.082405):0.035617,41:0.115349):0.051352,((42:0.196353,34:0.168724):0.036428,((((539:0.020568,205:0.028887):0.039891,500:0.068094):0.050028,476:0.130484):0.065937,((80:0.003996,393:0.003983):0.084663,333:0.089834):0.133992):0.04523):0.013623):0.017241,164:0.154573):0.033958,(((((((35:0.093463,540:0.072507):0.074571,53:0.099223):0.020272,(6:0.072121,47:0.083245):0.048392):0.038128,544:0.153492):0.027393,(((193:0.019914,481:0.017049):0.027318,317:0.039855):0.137522,((((((((((413:0.025373,182:0.014398):0.020335,((315:0.0,147:0.0):2.54E-4,77:4.38E-4):0.029295):0.012695,156:0.027998):0.015961,((((((((535:0.0,256:3.48E-4):5.22E-4,523:3.48E-4):0.0,253:0.0):0.0,320:0.0):1.74E-4,76:3.48E-4):0.028503,(93:2.83E-4,261:0.005107):0.026919):0.008581,244:0.050438):0.008421,(682:1.71E-4,547:0.001878):0.024032):0.041807):0.021744,623:0.054563):0.05338,((1:0.080084,2:0.095182):0.023186,(68:0.066164,527:0.059553):0.015357):0.01873):0.081897,((30:0.098036,453:0.100342):0.021978,21:0.097173):0.027185):0.031045,16:0.151197):0.032028,31:0.140115):0.027068,((465:0.012069,628:0.010019):0.097618,36:0.170224):0.084563):0.033468):0.03169):0.026445,(((266:0.027139,573:0.027351):0.021484,566:0.037328):0.090414,39:0.137426):0.05113):0.0286,((12:0.118628,632:0.133604):0.026332,391:0.242956):0.044904):0.019561):0.056195,((((580:4.77E-4,486:0.001073):0.033614,128:0.038791):0.051561,235:0.068116):0.044622,(605:0.065695,685:0.054499):0.056416):0.221144):0.045301,((146:1.88E-4,215:3.39E-4):0.040933,615:0.037617):0.303161):0.039753,(311:8.95E-4,327:6.79E-4):0.478476):0.120846,52:0.43829):0.090081,(((51:0.142154,13:0.088587):0.047811,29:0.117231):0.104268,8:0.269623):0.198082):0.036936,(50:0.383152,581:0.357989):0.109409):0.087352,(((((((((342:0.023543,419:0.044194):0.014221,((437:0.022222,329:0.025798):0.006423,462:0.032326):0.022152):0.016325,(((657:0.058394,335:0.053438):0.019947,((355:0.00276,658:0.002109):0.070906,((301:0.013908,222:0.016702):0.023743,(((515:0.005031,611:0.005416):0.003975,436:0.011185):0.004908,270:0.010415):0.020455):0.117983):0.022565):0.040798,(162:0.00429,528:0.003453):0.043557):0.012995):0.046129,208:0.067465):0.195828,(259:3.21E-4,516:0.00142):0.098101):0.061386,(((((277:0.004827,406:0.003501):0.036361,144:0.042386):0.086848,307:0.151445):0.024405,(((430:0.088208,59:0.108904):0.018975,206:0.111161):0.027275,570:0.127272):0.053965):0.023778,(298:0.127345,474:0.138774):0.035212):0.017944):0.063385,(204:0.023735,557:0.025648):0.172906):0.056598,132:0.211642):0.301851,(((((293:0.02822,704:0.017828):0.118476,268:0.154341):0.066504,459:0.219302):0.124086,(7:0.242004,20:0.272557):0.055029):0.055648,((488:5.54E-4,429:8.51E-4):0.017643,677:0.014048):0.50406):0.083393):0.032459):0.039409):0.035188):0.022061):0.039665):0.054226,(((414:0.127803,665:0.188887):0.074834,(((175:0.007577,231:5.3E-4):0.005057,226:0.006656):0.159923,541:0.230211):0.037393):0.080613,114:0.362128):0.246177):0.287154,((627:0.001498,696:0.001224):0.144321,(22:0.114423,17:0.077947):0.086289):0.12529):0.1212895,(274:0.043888,556:0.07314):0.1212895);
END;
|
