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#NEXUS
BEGIN TAXA;
TITLE ContainingTaxa;
DIMENSIONS NTAX=4;
TAXLABELS
A
B
C
D
;
END;
BEGIN TAXA;
TITLE EmbeddedTaxa;
DIMENSIONS NTAX=20;
TAXLABELS
A1
A2
A3
A4
A5
B1
B2
B3
B4
B5
C1
C2
C3
C4
C5
D1
D2
D3
D4
D5
;
END;
BEGIN TaxaAssociation;
TITLE TaxonSetMapping4312166160;
TAXA ContainingTaxa, EmbeddedTaxa;
ASSOCIATES
A / A1 A2 A3 A4 A5,
B / B1 B2 B3 B4 B5,
C / C1 C2 C3 C4 C5,
D / D1 D2 D3 D4 D5
;
END;
BEGIN TREES;
TITLE ContainingTree;
LINK TAXA = ContainingTaxa;
TREE 0 = [&R] (A:3.0,(B:2.0,(C:1.0,D:1.0):1.0):1.0):1.0;
END;
BEGIN TREES;
TITLE EmbeddedTrees;
LINK TAXA = EmbeddedTaxa;
TREE EmbeddedTree1 = [&R] [DC = 4] ((((C1:0.450620932881,C5:0.450620932881):0.565329846429,((C4:0.24499212609,C3:0.24499212609):0.618675750532,C2:0.863667876622):0.152282902687):2.06742015655,((B4:0.470088410247,((B5:0.0458696938757,B2:0.0458696938757):0.258449495818,(B1:0.215647689863,B3:0.215647689863):0.0886714998301):0.165769220553):2.13180677559,(((D4:0.503150921046,(D5:0.0558466483341,D2:0.0558466483341):0.447304272712):0.448050255494,D1:0.951201176541):0.308635208006,D3:1.25983638455):1.34205880129):0.481475750025):0.133294540813,(A3:2.7162445261,((A4:0.00102143235684,A2:0.00102143235684):1.2721967901,(A5:0.302997814149,A1:0.302997814149):0.970220408308):1.44302630364):0.500420950576):0.0;
TREE EmbeddedTree2 = [&R] [DC = 6] ((((B1:0.539033858532,B3:0.539033858532):0.107385432201,B2:0.646419290734):0.237980918556,B5:0.884400209289):2.80750075419,((((A3:0.419148579259,A1:0.419148579259):0.5454650941,A2:0.964613673359):0.778256431361,(A5:1.08567329259,A4:1.08567329259):0.657196812127):1.25873768999,((((D2:0.0116259460867,D1:0.0116259460867):0.0755338334993,D4:0.0871597795859):2.27706542906,((D3:1.15887659341,((C1:0.415361115978,C4:0.415361115978):0.0538366433068,(C2:0.328879606044,C3:0.328879606044):0.140318153241):0.689678834125):0.238646361279,(D5:1.04092790218,C5:1.04092790218):0.356595052504):0.966702253962):0.389557351132,B4:2.75378255978):0.247825234929):0.690293168763):0.0;
TREE EmbeddedTree3 = [&R] [DC = 4] ((((D1:1.10198896744,((D3:0.289337041699,D5:0.289337041699):0.0673700606214,(D4:0.021079825319,D2:0.021079825319):0.335627277001):0.745281865124):0.215127759984,(((C5:0.0990446162805,C3:0.0990446162805):0.101492236512,(C1:0.0986145890264,C2:0.0986145890264):0.101922263766):0.433215977658,C4:0.63375283045):0.683363896978):1.08440084729,((B4:0.035521089212,B5:0.035521089212):0.0858598606229,B1:0.121380949835):2.28013662489):2.91722983832,((A4:0.108671916776,((A1:0.0384506739539,A2:0.0384506739539):0.0166716179029,A5:0.0551222918569):0.0535496249195):3.2338578411,((B3:0.235082464005,B2:0.235082464005):3.07400819075,A3:3.30909065476):0.0334391031139):1.97621765516):0.0;
TREE EmbeddedTree4 = [&R] [DC = 2] ((((D5:0.355434811841,(D1:0.0669813441161,D4:0.0669813441161):0.288453467725):1.15549887402,((D2:0.539415862099,D3:0.539415862099):0.617708579946,((C2:0.240501894513,C1:0.240501894513):0.243258382111,((C3:0.0335837350052,C4:0.0335837350052):0.00594260491046,C5:0.0395263399156):0.444233936709):0.67336416542):0.353809243819):1.85876566548,((B3:0.400902590813,B5:0.400902590813):1.05791456312,(B2:0.222419153159,(B4:0.13501292802,B1:0.13501292802):0.0874062251384):1.23639800077):1.91088219741):2.70794818488,(A5:1.36565033324,((A4:0.109862434742,A1:0.109862434742):0.573917349966,(A2:0.262941202604,A3:0.262941202604):0.420838582104):0.681870548535):4.71199720298):0.0;
TREE EmbeddedTree5 = [&R] [DC = 4] ((A5:2.63946866488,(A4:0.266540392501,((A2:0.0175836474608,A1:0.0175836474608):0.187548106595,A3:0.205131754056):0.0614086384453):2.37292827238):2.52489209161,((B4:2.32250906146,((B2:0.0724698689456,B3:0.0724698689456):0.253226490999,(B5:0.239472644615,B1:0.239472644615):0.086223715329):1.99681270151):0.383293826723,(C3:1.3521599017,(((C5:0.0143226510005,C1:0.0143226510005):1.10558004515,(C2:1.09528316966,((D2:0.184003562504,(D5:0.0171201540801,(D1:0.00462262545172,D4:0.00462262545172):0.0124975286284):0.166883408424):0.737271631929,D3:0.921275194433):0.174007975226):0.0246195264968):0.137970539605,C4:1.25787323576):0.0942866659425):1.35364298648):2.45855786831):0.0;
TREE EmbeddedTree6 = [&R] [DC = 3] ((((A3:0.0024265259605,A5:0.0024265259605):1.21508820027,(A4:1.19774952365,(A2:0.115337026324,A1:0.115337026324):1.08241249732):0.0197652025857):1.94883462614,((((((D1:0.31721574531,D5:0.31721574531):0.158836701304,D4:0.476052446613):0.0060062934134,D3:0.482058740026):0.196852237996,D2:0.678910978023):1.03613957244,(C1:0.33641047734,(C4:0.110979495338,C2:0.110979495338):0.225430982002):1.37864007312):0.695128352663,(C3:0.131682017452,C5:0.131682017452):2.27849688567):0.756170449246):1.03074786521,((B3:0.207565060339,B5:0.207565060339):0.868352528296,(B1:0.312535064918,(B2:0.0955941639353,B4:0.0955941639353):0.216940900983):0.763382523717):3.12117962895):0.0;
TREE EmbeddedTree7 = [&R] [DC = 3] ((A3:0.523922134511,(((A4:0.0261469287289,A5:0.0261469287289):0.0155841719608,A2:0.0417311006898):0.0970831158426,A1:0.138814216532):0.385107917979):2.96179514005,((((B1:1.00977834549,(B3:0.107108387916,B2:0.107108387916):0.902669957577):0.301421775798,(B5:0.320886086945,B4:0.320886086945):0.990314034345):0.731668222692,(D3:0.704716623965,(D4:0.345120973952,D1:0.345120973952):0.359595650012):1.33815172002):1.28911467795,((D2:0.557168888268,D5:0.557168888268):0.465133250819,((C2:0.261247469709,C5:0.261247469709):0.616657056999,((C3:0.0240611371849,C1:0.0240611371849):0.376643741361,C4:0.400704878546):0.477199648162):0.14439761238):2.30968088284):0.153734252633):0.0;
TREE EmbeddedTree8 = [&R] [DC = 4] ((((D2:0.793989025811,((D4:0.473557625619,D1:0.473557625619):0.00765746817229,(D3:0.106526051981,D5:0.106526051981):0.374689041811):0.31277393202):0.426915797518,(C2:1.05851614223,(C1:0.509009328204,(C4:0.208313439364,C5:0.208313439364):0.30069588884):0.54950681403):0.162388681095):2.07418566856,((A2:0.900775750691,A1:0.900775750691):0.0479078493469,((A4:0.0672782874136,A5:0.0672782874136):0.270785750489,A3:0.338064037902):0.610619562136):2.34640689185):0.705273932843,(((B4:0.190963718624,((B1:0.103190176225,B2:0.103190176225):0.0551380807075,B5:0.158328256933):0.0326354616917):0.184603331877,B3:0.375567050501):1.80215479572,C3:2.17772184622):1.82264257851):0.0;
TREE EmbeddedTree9 = [&R] [DC = 5] ((C1:3.9507466562,(((A1:0.0596747930966,A3:0.0596747930966):0.0423608408543,A2:0.102035633951):0.678320139336,(A4:0.0289283270498,A5:0.0289283270498):0.751427446237):3.17039088292):0.432850554046,(((C2:0.438038408732,C5:0.438038408732):0.945673487272,(((D5:0.246064071462,(D3:0.199905780044,D1:0.199905780044):0.0461582914182):0.736282921486,(D4:0.154834805106,D2:0.154834805106):0.827512187842):0.333670263974,(C3:0.0952794759317,C4:0.0952794759317):1.22073778099):0.0676946390812):0.72987566398,((B1:1.36825651411,B3:1.36825651411):0.653094740411,((B2:0.164115108743,B5:0.164115108743):0.209484185458,B4:0.373599294202):1.64775196032):0.092236305464):2.27000965027):0.0;
TREE EmbeddedTree10 = [&R] [DC = 4] ((((A4:0.463510700757,((A5:0.000466923883818,A2:0.000466923883818):0.211991950755,A1:0.212458874638):0.251051826118):2.45851497798,A3:2.92202567874):0.427668943305,((((C3:0.255104277269,(C2:0.231219123687,(C5:0.157645826114,C1:0.157645826114):0.0735732975734):0.023885153582):0.458988319936,C4:0.714092597206):0.583410203513,((D3:0.142848297275,D1:0.142848297275):0.445957463008,D5:0.588805760283):0.708697040435):0.449313218521,(D2:0.149020225445,D4:0.149020225445):1.59779579379):1.60287860281):0.0279798023655,((B5:0.755003820734,B4:0.755003820734):2.44477883361,(B1:0.176805718765,(B2:0.141981378166,B3:0.141981378166):0.0348243405991):3.02297693558):0.177891770069):0.0;
END;
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