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# cython: embedsignature=True
# cython: profile=True
# adds doc-strings for sphinx
import tempfile
import os
import sys
import types
import itertools
import struct
import ctypes
import collections
import re
import platform
import warnings
from cpython cimport PyErr_SetString, \
PyBytes_Check, \
PyUnicode_Check, \
PyBytes_FromStringAndSize
from cpython.version cimport PY_MAJOR_VERSION
from pysam.libcalignmentfile cimport AlignmentFile, AlignedSegment
cdef class Samfile(AlignmentFile):
'''Deprecated alternative for :class:`~pysam.AlignmentFile`
Added for backwards compatibility with pysam <= 0.8.0
'''
pass
cdef class AlignedRead(AlignedSegment):
'''Deprecated alternative for :class:`~pysam.AlignedSegment`
Added for backwards compatibility with pysam <= 0.8.0
'''
pass
__all__ = ['Samfile', 'AlignedRead']
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