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.. _make_per_library_sff:
.. index:: make_per_library_sff.py
*make_per_library_sff.py* -- Make per-library sff files from ID lists
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**Description:**
This script generates per-library sff files using a directory of text files, one per library, which list read ID's to be included.
The ID list files should contain one read ID per line. If a line contains multiple words (separated by whitespace), then only the first word is used. A '>' character is stripped from the beginning of the line, if present. Blank lines in the file are skipped.
**Usage:** :file:`make_per_library_sff.py [options]`
**Input Arguments:**
.. note::
**[REQUIRED]**
-i, `-`-input_sff
Input sff file (separate multiple files w/ comma)
-l, `-`-libdir
Directory containing ID list text files, one per library
**[OPTIONAL]**
-p, `-`-sfffile_path
Path to sfffile binary [default: use sfffile in $PATH]
`-`-use_sfftools
Use external sfffile program instead of equivalent Python routines.
`-`-debug
Print debugging output to stdout [default: False]
**Output:**
The result of this script generates sff files for each library.
**Example:**
Make per-library sff files using input.sff and a directory of libs where each file in the directory contains the id lists for each library:
::
make_per_library_sff.py -i input.sff -l libs
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