1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39
|
\name{reverseCigar}
\alias{reverseCigar}
\title{reverseCigar function}
\description{
This function reverses the cigar string, i.e.,
20M15I10D will be reversed to 10D15I20M.}
\usage{
reverseCigar(cigar, ops=CIGAR_OPS)
}
\arguments{
\item{cigar}{
A character vector of cigar strings.
}
\item{ops}{
A character vector of the extended CIGAR operations.
By default, CIGAR_OPS is used.
}
}
\value{
A character vector contains the reversed cigar strings.
}
\author{
Ge Tan
}
\seealso{
\code{\link[GenomicAlignments]{cigar-utils}}
}
\examples{
cigar = c("20M15I10D", "10D15I20M")
reverseCigar(cigar)
}
|