File: test-plot_bootstrapped_contribution.R

package info (click to toggle)
r-bioc-mutationalpatterns 3.8.1%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 5,336 kB
  • sloc: sh: 8; makefile: 2
file content (19 lines) | stat: -rw-r--r-- 573 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
context("test-plot_bootstrapped_contribution")

## contri_boots
contri_boots <- readRDS(system.file("states/bootstrapped_snv_refit.rds",
  package = "MutationalPatterns"
))

## Plot contexts

test_that("Output has correct class", {
  output <- plot_bootstrapped_contribution(contri_boots)
  expect_true(inherits(output, c("gg")))

  output <- plot_bootstrapped_contribution(contri_boots, mode = "relative")
  expect_true(inherits(output, c("gg")))

  output <- plot_bootstrapped_contribution(contri_boots, plot_type = "barplot")
  expect_true(inherits(output, c("gg")))
})