File: Snakefile

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snakemake 7.32.4-8.1
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file content (30 lines) | stat: -rw-r--r-- 409 bytes parent folder | download | duplicates (3) 
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rule all:
    input:
        "test.vcf.gz",


rule a:
    output:
        "{prefix}.txt",
    shell:
        "touch {output}"


rule b:
    input:
        "{prefix}.txt",
    output:
        "{prefix}.vcf",
    script:
        "test.py"


rule bgzip:
    input:
        "{prefix}.vcf",
    output:
        "{prefix}.vcf.gz",
    log:
        "logs/bgzip/{prefix}.log",
    wrapper:
        "v1.1.0/bio/bgzip"