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|
from pathlib import Path
configfile: "config.yaml"
rule all:
input:
"test.out",
"test.html",
"rel_source.out",
"julia.out",
"rust.out",
"rust-manifest.out",
"rust-outer-line-doc.out",
"bash.out",
rule:
input:
"test.in"
output:
txt="test.out"
params:
xy=True
conda:
"envs/r.yaml"
script:
"scripts/test.R"
rule:
output:
"test.in"
script:
Path("scripts/test.py")
rule:
output:
"test.html"
params:
test="testparam"
conda:
"envs/r.yaml"
script:
"scripts/test.Rmd"
rule:
output:
"rel_source.out"
conda:
"envs/r.yaml"
script:
"scripts/rel_source.R"
rule:
input:
"test.in",
named_input="test.in"
output:
"julia.out"
params:
integer=123
conda:
"envs/julia.yaml"
script:
"scripts/test.jl"
rule:
input:
"test.in",
"test2.in",
["test.in", "test2.in"],
named_input="test.in",
output:
"rust.out",
params:
integer=123
conda:
"envs/rust.yaml"
script:
"scripts/test.rs"
rule:
output:
"rust-manifest.out",
params:
keep="-"
conda:
"envs/rust.yaml"
log:
"rust-manifest.log"
script:
"scripts/test-manifest.rs"
rule:
output:
"rust-outer-line-doc.out",
params:
keep="-",
conda:
"envs/rust.yaml"
script:
"scripts/test-outer-line-doc.rs"
rule bash:
input:
"test2.in",
named_input="test.in",
output:
"bash.out"
params:
integer=123,
string="foo",
d={"a": "foo"}
resources:
mem_mb=1024
log:
"bash.log"
conda:
"envs/bash.yaml"
script:
"scripts/test.sh"
|
