File: Snakefile

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import yaml

include: "echo.rule"
include: "cp.rule"

configfile: "test.yaml"

rule all:
    input: "test.out.copy"
    output: yaml = "config.yaml"
    run:
        with open(str(output.yaml), "w") as fh:
            fh.write(yaml.dump(config, default_flow_style=False))