File: sample_3Dseq1.struc_tree.list

package info (click to toggle)
t-coffee 13.45.0.4846264%2Breally13.41.0.28bdc39%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: bookworm, forky, sid, trixie
  • size: 24,612 kB
  • sloc: ansic: 116,968; perl: 17,907; fortran: 2,049; makefile: 43; sh: 40
file content (33 lines) | stat: -rw-r--r-- 6,727 bytes parent folder | download | duplicates (2) 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
 

>Tree_1 Column
(((((((((TNFR10-2:0.06000,TNFR1-2:0.06000):0.06000,TNFR4-2:0.06000):0.09000,TNFR14-2:0.09000):0.12000,(TNFR10-3:0.06000,TNFR2-2:0.06000):0.12000):0.14000,((TNFR16-2:0.07000,TNFR2-4:0.07000):0.09000,TNFR16-4:0.09000):0.14000):0.16000,TNFR16-3:0.16000):0.28000,(TNFR4-4:0.23000,TNFR2-3:0.23000):0.28000):0.34000,TNFR1-3:0.34000):0.71000,(((((TNFR1-1:0.18000,TNFR2-1:0.18000):0.21000,TNFR4-1:0.21000):0.33000,(TNFR14-1:0.21000,TNFR16-1:0.21000):0.33000):0.45000,((TNFR1-4:0.27000,TNFR12-1:0.27000):0.36000,(TNFR13B-2:0.27000,TNFR17-1:0.27000):0.36000):0.45000):0.46000,TNFR13C-1:0.46000):0.71000);

>Tree_2 Column
((((((TNFR10-2:0.12000,TNFR16-2:0.12000):0.15000,(TNFR16-3:0.10000,TNFR2-4:0.10000):0.15000):0.21000,((((TNFR10-3:0.07000,TNFR2-2:0.07000):0.11000,(TNFR1-2:0.07000,TNFR4-2:0.07000):0.11000):0.14000,TNFR16-4:0.14000):0.15000,TNFR14-2:0.15000):0.21000):0.33000,TNFR1-3:0.33000):0.36000,(TNFR4-4:0.27000,TNFR2-3:0.27000):0.36000):0.69000,((((TNFR1-1:0.25000,TNFR2-1:0.25000):0.28000,TNFR4-1:0.28000):0.45000,((TNFR14-1:0.23000,TNFR16-1:0.23000):0.36000,TNFR13C-1:0.36000):0.45000):0.60000,(((TNFR1-4:0.29000,TNFR12-1:0.29000):0.40000,TNFR17-1:0.40000):0.47000,TNFR13B-2:0.47000):0.60000):0.69000);

>Tree_5 Column
((((((TNFR10-2:0.09000,TNFR16-2:0.09000):0.18000,TNFR2-4:0.18000):0.22000,((TNFR10-3:0.12000,TNFR2-2:0.12000):0.15000,((((TNFR1-2:0.08000,TNFR4-2:0.08000):0.10000,TNFR16-3:0.10000):0.10000,TNFR14-2:0.10000):0.14000,TNFR16-4:0.14000):0.15000):0.22000):0.28000,(TNFR1-3:0.23000,TNFR4-4:0.23000):0.28000):0.30000,TNFR2-3:0.30000):0.67000,(((((TNFR1-1:0.25000,(TNFR14-1:0.17000,(TNFR4-1:0.14000,TNFR2-1:0.14000):0.17000):0.25000):0.32000,TNFR13C-1:0.32000):0.35000,TNFR12-1:0.35000):0.51000,((TNFR1-4:0.31000,TNFR17-1:0.31000):0.39000,TNFR13B-2:0.39000):0.51000):0.59000,TNFR16-1:0.59000):0.67000);

>Tree_7 Column
((((((TNFR10-2:0.10000,TNFR16-1:0.10000):0.12000,TNFR16-2:0.12000):0.25000,TNFR1-3:0.25000):0.28000,(((TNFR10-3:0.09000,TNFR2-2:0.09000):0.17000,(((((TNFR1-2:0.05000,TNFR14-2:0.05000):0.08000,TNFR4-2:0.08000):0.09000,TNFR16-4:0.09000):0.09000,TNFR2-4:0.09000):0.12000,TNFR16-3:0.12000):0.17000):0.22000,TNFR4-4:0.22000):0.28000):0.35000,TNFR2-3:0.35000):0.72000,(((TNFR1-1:0.21000,((TNFR14-1:0.14000,TNFR4-1:0.14000):0.16000,TNFR2-1:0.16000):0.21000):0.51000,TNFR13C-1:0.51000):0.58000,((TNFR1-4:0.34000,TNFR12-1:0.34000):0.40000,(TNFR13B-2:0.25000,TNFR17-1:0.25000):0.40000):0.58000):0.72000);

>Tree_9 Column
((((((((((((TNFR10-2:0.03000,TNFR1-2:0.03000):0.04000,TNFR10-3:0.04000):0.05000,TNFR14-2:0.05000):0.05000,TNFR16-4:0.05000):0.06000,(TNFR16-2:0.05000,TNFR2-4:0.05000):0.06000):0.08000,(TNFR16-3:0.06000,TNFR4-2:0.06000):0.08000):0.11000,TNFR4-4:0.11000):0.16000,TNFR1-3:0.16000):0.20000,TNFR2-3:0.20000):0.26000,TNFR2-2:0.26000):0.29000,TNFR16-1:0.29000):0.68000,(((((TNFR1-1:0.10000,TNFR2-1:0.10000):0.12000,TNFR4-1:0.12000):0.16000,TNFR14-1:0.16000):0.39000,((TNFR1-4:0.28000,(TNFR13B-2:0.12000,TNFR17-1:0.12000):0.28000):0.32000,TNFR12-1:0.32000):0.39000):0.48000,TNFR13C-1:0.48000):0.68000);

>Tree_10 Column
(((((((((((TNFR10-2:0.03000,TNFR1-2:0.03000):0.03000,TNFR14-2:0.03000):0.04000,TNFR16-3:0.04000):0.05000,TNFR10-3:0.05000):0.05000,TNFR4-2:0.05000):0.06000,(TNFR16-2:0.04000,TNFR2-4:0.04000):0.06000):0.06000,TNFR16-4:0.06000):0.09000,TNFR2-2:0.09000):0.16000,TNFR1-3:0.16000):0.18000,(TNFR4-4:0.13000,TNFR2-3:0.13000):0.18000):0.70000,(((((((TNFR1-1:0.08000,TNFR2-1:0.08000):0.13000,TNFR4-1:0.13000):0.17000,TNFR14-1:0.17000):0.27000,(TNFR13B-2:0.12000,TNFR17-1:0.12000):0.27000):0.28000,TNFR1-4:0.28000):0.35000,(TNFR16-1:0.29000,TNFR12-1:0.29000):0.35000):0.48000,TNFR13C-1:0.48000):0.70000);

>Tree_27 Column
(((((((((TNFR10-2:0.04000,(((TNFR1-2:0.03000,TNFR14-2:0.03000):0.03000,TNFR4-2:0.03000):0.03000,TNFR2-4:0.03000):0.04000):0.06000,TNFR16-4:0.06000):0.07000,TNFR16-2:0.07000):0.07000,TNFR16-3:0.07000):0.11000,TNFR1-3:0.11000):0.15000,(TNFR10-3:0.08000,TNFR2-2:0.08000):0.15000):0.20000,(TNFR1-4:0.11000,(TNFR13B-2:0.07000,TNFR17-1:0.07000):0.11000):0.20000):0.27000,(((((TNFR1-1:0.09000,TNFR2-1:0.09000):0.10000,TNFR14-1:0.10000):0.12000,TNFR16-1:0.12000):0.15000,TNFR4-1:0.15000):0.17000,TNFR12-1:0.17000):0.27000):0.69000,(TNFR13C-1:0.51000,(TNFR4-4:0.17000,TNFR2-3:0.17000):0.51000):0.69000);

>Tree_33 Column
(((((((((((TNFR10-2:0.04000,TNFR1-2:0.04000):0.04000,TNFR14-2:0.04000):0.05000,(TNFR16-4:0.04000,TNFR4-4:0.04000):0.05000):0.05000,TNFR4-2:0.05000):0.06000,TNFR16-3:0.06000):0.07000,TNFR2-4:0.07000):0.08000,(TNFR1-3:0.06000,TNFR16-2:0.06000):0.08000):0.13000,TNFR10-3:0.13000):0.13000,TNFR2-2:0.13000):0.13000,TNFR2-3:0.13000):0.70000,(((((TNFR1-1:0.10000,((TNFR14-1:0.05000,TNFR2-1:0.05000):0.07000,TNFR4-1:0.07000):0.10000):0.19000,TNFR16-1:0.19000):0.24000,(TNFR13B-2:0.14000,TNFR12-1:0.14000):0.24000):0.27000,(TNFR1-4:0.08000,TNFR17-1:0.08000):0.27000):0.42000,TNFR13C-1:0.42000):0.70000);

>Tree_44 Column
(((((((TNFR10-2:0.06000,(((TNFR1-2:0.04000,(TNFR14-2:0.03000,TNFR4-2:0.03000):0.04000):0.04000,TNFR16-4:0.04000):0.05000,TNFR16-2:0.05000):0.06000):0.07000,(TNFR16-3:0.06000,TNFR2-4:0.06000):0.07000):0.10000,(TNFR10-3:0.08000,TNFR2-2:0.08000):0.10000):0.19000,TNFR4-4:0.19000):0.30000,(TNFR13C-1:0.20000,TNFR2-3:0.20000):0.30000):0.33000,(((((TNFR1-1:0.09000,(TNFR4-1:0.05000,TNFR2-1:0.05000):0.09000):0.13000,TNFR14-1:0.13000):0.16000,TNFR16-1:0.16000):0.19000,TNFR1-3:0.19000):0.26000,(TNFR1-4:0.10000,TNFR12-1:0.10000):0.26000):0.33000):0.68000,(TNFR13B-2:0.13000,TNFR17-1:0.13000):0.68000);

>Tree_55 Column
((((((((((((TNFR10-2:0.04000,TNFR1-2:0.04000):0.05000,TNFR14-2:0.05000):0.05000,TNFR2-2:0.05000):0.07000,TNFR16-4:0.07000):0.09000,((TNFR10-3:0.07000,TNFR4-2:0.07000):0.08000,TNFR16-3:0.08000):0.09000):0.09000,TNFR16-2:0.09000):0.10000,TNFR2-4:0.10000):0.14000,TNFR1-3:0.14000):0.18000,((((TNFR1-1:0.06000,TNFR4-1:0.06000):0.07000,TNFR14-1:0.07000):0.08000,TNFR2-1:0.08000):0.14000,TNFR16-1:0.14000):0.18000):0.24000,(TNFR4-4:0.11000,TNFR2-3:0.11000):0.24000):0.54000,TNFR13C-1:0.54000):0.72000,((TNFR1-4:0.31000,TNFR12-1:0.31000):0.45000,(TNFR13B-2:0.19000,TNFR17-1:0.19000):0.45000):0.72000);

>Tree_56 Column
((((((((((((TNFR10-2:0.03000,TNFR1-2:0.03000):0.04000,TNFR14-2:0.04000):0.05000,(TNFR16-3:0.04000,TNFR4-2:0.04000):0.05000):0.06000,TNFR10-3:0.06000):0.07000,(TNFR16-4:0.06000,TNFR2-2:0.06000):0.07000):0.08000,(TNFR16-2:0.07000,TNFR2-4:0.07000):0.08000):0.11000,TNFR1-3:0.11000):0.13000,((((TNFR1-1:0.03000,TNFR4-1:0.03000):0.05000,TNFR2-1:0.05000):0.06000,TNFR14-1:0.06000):0.10000,TNFR16-1:0.10000):0.13000):0.18000,(TNFR4-4:0.10000,TNFR2-3:0.10000):0.18000):0.34000,(TNFR13B-2:0.11000,TNFR17-1:0.11000):0.34000):0.47000,(TNFR1-4:0.20000,TNFR12-1:0.20000):0.47000):0.75000,TNFR13C-1:0.75000);