Package: python-pbcore / 2.1.2+dfsg-5

Metadata

Package Version Patches format
python-pbcore 2.1.2+dfsg-5 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
doc theme.patch | (download)

doc/conf.py | 3 1 + 2 - 0 !
1 file changed, 1 insertion(+), 2 deletions(-)

 use default sphinx theme for documentation
 The upstream's original theme includes their corporate
 logo. To be safe, this patch ignores it and configures
 the documentation builder to use the default theme.
exclude_test_missing_data.patch | (download)

pytest.ini | 1 0 + 1 - 0 !
setup.py | 1 0 + 1 - 0 !
tests/test_pbdataset_metadata.py | 1 1 + 0 - 0 !
3 files changed, 1 insertion(+), 2 deletions(-)

 missing data for this test


b24746790c7105212e45dc2f40115d231bd8baae.patch | (download)

Makefile | 6 1 + 5 - 0 !
bin/updateXSDs.py | 49 0 + 49 - 0 !
pbcore/io/dataset/DataSetValidator.py | 40 20 + 20 - 0 !
pbcore/io/dataset/pyxb/DataSetXsd.py | 4355 0 + 4355 - 0 !
pbcore/io/dataset/pyxb/__init__.py | 3 0 + 3 - 0 !
pbcore/io/dataset/pyxb/_pbbase.py | 5916 0 + 5916 - 0 !
pbcore/io/dataset/pyxb/_pbmeta.py | 2967 0 + 2967 - 0 !
pbcore/io/dataset/pyxb/_pbrk.py | 1379 0 + 1379 - 0 !
pbcore/io/dataset/pyxb/_pbsample.py | 544 0 + 544 - 0 !
setup.py | 4 2 + 2 - 0 !
10 files changed, 23 insertions(+), 15240 deletions(-)

 [patch] [sl-5880] abandon pyxb, use xmlschema for validation if
 installed (and xsd is defined)

Fixes #122

seek curdir for xml.patch | (download)

pbcore/chemistry/chemistry.py | 6 5 + 1 - 0 !
1 file changed, 5 insertions(+), 1 deletion(-)

 try looking for mapping.xml in the current directory 
 helps when package is not installed for generating docs etc
numpy_1.24.patch | (download)

pbcore/io/dataset/DataSetMembers.py | 6 3 + 3 - 0 !
1 file changed, 3 insertions(+), 3 deletions(-)

 fix attributeerror: module 'numpy' has no attribute 'float'.
 with numpy/1.24.1