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/*
* odum.cpp
* Mothur
*
* Created by westcott on 12/14/10.
* Copyright 2010 Schloss Lab. All rights reserved.
*
*/
#include "odum.h"
/***********************************************************************/
EstOutput Odum::getValues(vector<SharedRAbundVector*> shared) {
try {
data.resize(1,0);
double sumNum = 0.0;
double sumDenom = 0.0;
for (int i = 0; i < shared[0]->getNumBins(); i++) {
int Aij = shared[0]->get(i);
int Bij = shared[1]->get(i);
sumNum += abs(Aij - Bij);
sumDenom += (Aij + Bij);
}
data[0] = sumNum / sumDenom;
if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }
return data;
}
catch(exception& e) {
m->errorOut(e, "Odum", "getValues");
exit(1);
}
}
/***********************************************************************/
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