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Folder: deeptools
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.. (parent) | |||
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d | rwxr-xr-x | 4,096 | test |
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- | rw-r--r-- | 7,005 | SES_scaleFactor.py |
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- | rw-r--r-- | 0 | __init__.py |
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- | rwxr-xr-x | 179 | _version.py |
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- | rw-r--r-- | 17,715 | alignmentSieve.py |
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- | rw-r--r-- | 14,236 | bamCompare.py |
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- | rw-r--r-- | 18,593 | bamCoverage.py |
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- | rw-r--r-- | 3,346 | bamHandler.py |
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- | rw-r--r-- | 21,006 | bamPEFragmentSize.py |
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- | rw-r--r-- | 8,066 | bigwigCompare.py |
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- | rw-r--r-- | 44,831 | cm.py |
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- | rw-r--r-- | 30,957 | computeGCBias.py |
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- | rw-r--r-- | 23,261 | computeMatrix.py |
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- | rwxr-xr-x | 31,980 | computeMatrixOperations.py |
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- | rwxr-xr-x | 26,142 | correctGCBias.py |
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- | rw-r--r-- | 28,026 | correlation.py |
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- | rw-r--r-- | 3,773 | correlation_heatmap.py |
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- | rw-r--r-- | 42,163 | countReadsPerBin.py |
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- | rw-r--r-- | 10,947 | deepBlue.py |
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- | rw-r--r-- | 3,237 | deeptools_list_tools.py |
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- | rw-r--r-- | 16,547 | estimateReadFiltering.py |
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- | rw-r--r-- | 7,018 | getFragmentAndReadSize.py |
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- | rw-r--r-- | 2,326 | getRatio.py |
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- | rw-r--r-- | 12,769 | getScaleFactor.py |
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- | rw-r--r-- | 11,968 | getScorePerBigWigBin.py |
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- | rw-r--r-- | 58,994 | heatmapper.py |
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- | rw-r--r-- | 7,169 | heatmapper_utilities.py |
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- | rw-r--r-- | 9,786 | mapReduce.py |
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- | rw-r--r-- | 597 | misc.py |
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- | rw-r--r-- | 11,652 | multiBamSummary.py |
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- | rw-r--r-- | 12,672 | multiBigwigSummary.py |
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- | rwxr-xr-x | 45,301 | parserCommon.py |
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- | rw-r--r-- | 10,831 | plotCorrelation.py |
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- | rw-r--r-- | 16,178 | plotCoverage.py |
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- | rw-r--r-- | 25,084 | plotEnrichment.py |
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- | rw-r--r-- | 19,729 | plotFingerprint.py |
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- | rw-r--r-- | 37,605 | plotHeatmap.py |
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- | rw-r--r-- | 9,319 | plotPCA.py |
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- | rwxr-xr-x | 39,100 | plotProfile.py |
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- | rw-r--r-- | 9,902 | sumCoveragePerBin.py |
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- | rw-r--r-- | 14,155 | utilities.py |
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- | rw-r--r-- | 13,224 | writeBedGraph.py |
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- | rw-r--r-- | 8,951 | writeBedGraph_bam_and_bw.py |